|
Name : rplS (BRE_705) Accession : YP_002223145.1 Strain : Borrelia recurrentis A1 Genome accession: NC_011244 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L19 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0335 EC number : - Position : 756666 - 757034 bp Length : 369 bp Strand : + Note : this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site DNA sequence : ATGATGGATTTGATAAGAAAAATTGAGGCTAAAGGCAAGAGAGCAGAAAGTTTTGATTTTAGGGTAGGAGATACTATACG TGTTAGTTATAAAATCATAGAAGGAACTAACGAGAGAATTCAAAATTTTGAAGGTCTTGTTATATCTATTCAAAATAAAG GGATAGGTCAAACTTTTTTAGTTAGAAAAATTTCTTCAGGAATTGGAGTTGAGAAAATTTTTCCTATGCATTCACCTATT ATCGAAAAAGTTCAGGTTTTAAAGAGAGGAAAAGTAAGAGGCGCTAAGCTTTATTATATGCGAGATAGAATTGGTAAAGC TGCTATGAAAGTAAAAGAACGTCTTGATGTTAAGAAACTTAAATATTGA Protein sequence : MMDLIRKIEAKGKRAESFDFRVGDTIRVSYKIIEGTNERIQNFEGLVISIQNKGIGQTFLVRKISSGIGVEKIFPMHSPI IEKVQVLKRGKVRGAKLYYMRDRIGKAAMKVKERLDVKKLKY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rplS | CAA68924.1 | ribosomal protein L19 | Not tested | Internalin | Protein | 1e-23 | 54 |
| rplS | AAS66827.1 | 50S ribosomal subunit protein | Not tested | SSR-1 | Protein | 2e-25 | 49 |
