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Name : fliI (BRE_295) Accession : YP_002222763.1 Strain : Borrelia recurrentis A1 Genome accession: NC_011244 Putative virulence/resistance : Virulence Product : flagellum-specific ATP synthase Function : - COG functional category : N : Cell motility COG ID : COG1157 EC number : 3.6.3.14 Position : 319373 - 320683 bp Length : 1311 bp Strand : - Note : - DNA sequence : TTGATGGATAATTTTTTTGAAGGTTATTCAAATATATTAGATGATATTCATACTATATCTTTTATTGGTAGGGTAAAAAA AATTAAAGGACTTTTGCTGGAAAGTTTAGGTCCAAAATGTGGTATTGGTGATTTATGTTTAATTGAGCAGAGTTGTGGAA AAAAAATATATGCGGAAGTTTTAGGTTTTAATGGATCTTGTGTGAGTCTTATGGCTTATGAAGGATTTGATGGGATTAAG GTTGGAGATAAAGTTTATTCCTTAAATAAGAAACCTCAAATTAATCTTAGTGATGAATTACTTGGAAGGGTGATTGATTC GCTTGGAAGGCCTATTGATAACAAAGGTCCGTTTTTTGGTAATAATTATAAAGAATTAAGTTTTAGTAGTATTAATCCCT TAGATAGAGGTGTTTTTACTGAGCAAATAGTTACTGGGGTTAGAGTTCTTGATGGATTTTTGCCAGTGGCACGGGGACAA CGTGTGGGTATTTTTTCAGGTGCTGGTGTTGGCAAGTCTACTTTGCTTGGTATGATTGCTAAGAATTCAAAAGCAGATGT TAATGTCATTGCATTTATTGGGGAGAGAGGTCGTGAACTTAATGAATTTATTAAATATGAGCTTGGAAATGGATGTTTTA ATAGAAGTGTTTTAATTGTGTCAACTTCTGATGAGTCTCCTATTTCAAGATATAAGGGGGCTTATACAGCAACATTAGTG GCTGAACATTTTAGAGATTGTGGAATGGATGTTATGTTATTGTTTGATTCAATTACAAGATTTGCAAATGCTAAAAGAGA AATTAGTCTTTCGATGGGAGAGCCCCCTGCTACTAAAGGATATCCTCCGTCTGTTTTTGTGGAAATTCCTATTTTGCTTG AGCGTTCAGGACTTAATGCAAAGGGTAGTATTACAGGATTTTATACTGTGCTTGTTGAGGGTGATGATTTTAGTGAACCT ATATCTGATAATATGAAGGCTGTTTTGGATGGACACATTATTTTAGATAGAGATTTGTCTGATAAAGGAATTTATCCTTC GGTAAATATTTTAAATTCAACCTCAAGATCTCTTCATAGAATAGTCAATTTTGAGAAACAAAAATTGATATCTAAAATTA GGAATTTGTTATCAATTTATAAAAGCTATGAGGATTTAATTAAAACAGGGATTTATGTTAAGGGTTCTAATAAAGAAGTT GATTTAGCTATTGCAAAATATCCAAAAATTATTGATTTTTTATCCCAAGGGATGCAGGAAGAATGTGATTTTGAAAATTT GGATAATGAAATGAGAGAAATATTAGCTTGA Protein sequence : MMDNFFEGYSNILDDIHTISFIGRVKKIKGLLLESLGPKCGIGDLCLIEQSCGKKIYAEVLGFNGSCVSLMAYEGFDGIK VGDKVYSLNKKPQINLSDELLGRVIDSLGRPIDNKGPFFGNNYKELSFSSINPLDRGVFTEQIVTGVRVLDGFLPVARGQ RVGIFSGAGVGKSTLLGMIAKNSKADVNVIAFIGERGRELNEFIKYELGNGCFNRSVLIVSTSDESPISRYKGAYTATLV AEHFRDCGMDVMLLFDSITRFANAKREISLSMGEPPATKGYPPSVFVEIPILLERSGLNAKGSITGFYTVLVEGDDFSEP ISDNMKAVLDGHIILDRDLSDKGIYPSVNILNSTSRSLHRIVNFEKQKLISKIRNLLSIYKSYEDLIKTGIYVKGSNKEV DLAIAKYPKIIDFLSQGMQEECDFENLDNEMREILA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcN | YP_362163.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 5e-82 | 43 |
| hrpB6 | AAB08461.1 | HrpB6 | Virulence | Hrp PAI | Protein | 4e-82 | 43 |
| ssaN | NP_456113.1 | putative type III secretion ATP synthase | Virulence | SPI-2 | Protein | 3e-79 | 42 |
| ssaN | NP_805086.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 3e-79 | 42 |
| ssaN | NP_460380.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 8e-80 | 42 |
| ssaN | YP_216423.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 2e-80 | 42 |
| ssaN | CAA70537.1 | secretion system apparatus | Virulence | SPI-2 | Protein | 6e-80 | 42 |
| XC_3006 | YP_244074.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 9e-84 | 42 |
| hrcN | NP_636610.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 9e-84 | 42 |
| YPO0267 | YP_002345348.1 | type III secretion system ATPase | Virulence | Not named | Protein | 1e-79 | 42 |
| hrpB6 | AAF61281.1 | HrpB6 | Virulence | Hrp PAI | Protein | 7e-82 | 42 |
| hrpB6 | BAB07852.1 | HrpB6 | Virulence | Hrp PAI | Protein | 7e-82 | 42 |
| hrcN | YP_198730.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 1e-81 | 42 |
| hrcN | NP_640767.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 1e-80 | 42 |
| hrcN | AAP34339.1 | HrcN | Virulence | Hrp PAI | Protein | 2e-81 | 42 |
| hrcN | AAG33879.1 | HrcN | Virulence | Hrp PAI | Protein | 5e-66 | 41 |
| lscN | AAO18044.1 | LscN | Virulence | TTSS locus | Protein | 5e-78 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fliI | YP_002222763.1 | flagellum-specific ATP synthase | VFG2499 | Protein | 1e-82 | 46 |
| fliI | YP_002222763.1 | flagellum-specific ATP synthase | VFG2144 | Protein | 2e-89 | 45 |
| fliI | YP_002222763.1 | flagellum-specific ATP synthase | VFG2331 | Protein | 3e-78 | 43 |
| fliI | YP_002222763.1 | flagellum-specific ATP synthase | VFG1254 | Protein | 1e-85 | 43 |
| fliI | YP_002222763.1 | flagellum-specific ATP synthase | VFG0048 | Protein | 1e-82 | 43 |
| fliI | YP_002222763.1 | flagellum-specific ATP synthase | VFG0390 | Protein | 4e-82 | 43 |
| fliI | YP_002222763.1 | flagellum-specific ATP synthase | VFG0515 | Protein | 4e-80 | 42 |
| fliI | YP_002222763.1 | flagellum-specific ATP synthase | VFG0192 | Protein | 8e-83 | 41 |
