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Name : Lferr_0769 (Lferr_0769) Accession : YP_002219226.1 Strain : Acidithiobacillus ferrooxidans ATCC 53993 Genome accession: NC_011206 Putative virulence/resistance : Unknown Product : nucleotide sugar dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1004 EC number : 1.1.1.22 Position : 730293 - 731597 bp Length : 1305 bp Strand : + Note : KEGG: cau:Caur_2850 nucleotide sugar dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP- DNA sequence : ATGAAGCACATCGTAGTCATTGGTGTCGGGTATGTAGGGTTGACGACTGCGGCCTTCCTGGCCGAGTTAGGGCACCACGT CACAGGAGTGGACATGGACGAAGGGAAGATCGTCCTGCTGCGTCAGGGCCGGATTCCCTTCATTGAACCAGAGCTTCCCG AACTGGTGGAGCGGAACGTCCGGGCCGGTCGCCTCAATTTCACCACCTCTTGCCAGAAAGCCATGCCGCATGCAGATATG GCCTTCATCTGCGTCGGCACGCCACCGACTCCCAGCGGACATGCCGACATGAGTCAGGTGGAAGAAGCCGCCCGGCAGGT TGCCCTCGCGGCGACGCAGCCCCTTATCGTCGTCCTCAAGAGCACCACCCCTCCCGGCGGAAATGCTGAGCGCGTGGCCG CCATCCTGGCAAGCCATCTGTCGCCGGGAATGGATGCCCCGCTGGTCGTCAACCCCGAATTTCTCCGCGAAGGATCGGCG GTATATGACACCTTCCACCCGGATCGTGCCGTGATCGGTGCCTGGGACAGCGCGGCTGCAGAAGAAGTGGCGGCGTTGTA TGCCCCCCTGCGCTGCCCCGTTCTCCTGACGGACCCGGCCAGCGCCCAACTCACCAAATATGCCTCCAACGCCTTCCTGG CCACCAAGATCTCTTTCATCAACGAGATATCCCGTATTGCCGAGCGGGTAGGGGCCAATATCCATGCCATTGCCCAAGGC ATGGGGTTCGACGAGCGCATTGGCGCCGAATTCCTGGAGTCCGGCCTTGGCTACGGGGGCTCCTGCTTCCCCAAGGACGT CCTGGCCCTGTCCGCCATTGCGGAACAGCAGGGGTATTATTCGCAATTTCTGCATGCGGTCACGGACATCAATGCCGGCC AGTGCAGTCTCGCCGTCGAGAAACTCGGTGACGCACTGGGGGGGTTCCACGGCAAGGCGGTATGCGTTCTCGGGCTGGCT TTCAAACCACAGACCGACGACGTGCGCGAGTCACCCGCCTTATCCGTGATTTCCATGCTTTGCCGGCAGGGCGCTGTTGT CCAGGCCTATGACCCGGCCGCCATGTCTACCGCGCAAAAAGTGCTGCCACCCCATGCTGCCCTGGAATATTGCGCCGATG CCTATGCTGCGGCGCTGGGTTGTCATGCCGTCCTGATCGCCACCAACTGGCCGGAATTTCGCAGCCTCGACTGGTCGCAC ATCCATTCTTCGATGGCGGGTAAGGCGGTCATGGACGGTCGTGGTTTGCTTTCACCGGATGAGATGCGCGGCATGGGGTT CGAATATCTGGCCTTCGCCAACTAG Protein sequence : MKHIVVIGVGYVGLTTAAFLAELGHHVTGVDMDEGKIVLLRQGRIPFIEPELPELVERNVRAGRLNFTTSCQKAMPHADM AFICVGTPPTPSGHADMSQVEEAARQVALAATQPLIVVLKSTTPPGGNAERVAAILASHLSPGMDAPLVVNPEFLREGSA VYDTFHPDRAVIGAWDSAAAEEVAALYAPLRCPVLLTDPASAQLTKYASNAFLATKISFINEISRIAERVGANIHAIAQG MGFDERIGAEFLESGLGYGGSCFPKDVLALSAIAEQQGYYSQFLHAVTDINAGQCSLAVEKLGDALGGFHGKAVCVLGLA FKPQTDDVRESPALSVISMLCRQGAVVQAYDPAAMSTAQKVLPPHAALEYCADAYAAALGCHAVLIATNWPEFRSLDWSH IHSSMAGKAVMDGRGLLSPDEMRGMGFEYLAFAN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| udgA | YP_005682185.1 | UDP-glucose 6-dehydrogenase | Not tested | PiCp 7 | Protein | 2e-47 | 44 |
| udgA | YP_003784334.1 | UDP-glucose 6-dehydrogenase | Not tested | PiCp 7 | Protein | 2e-47 | 44 |
| udgA | YP_005686369.1 | UDP-glucose 6-dehydrogenase | Not tested | PiCp 7 | Protein | 2e-47 | 44 |
