|
Name : Lferr_0640 (Lferr_0640) Accession : YP_002219100.1 Strain : Acidithiobacillus ferrooxidans ATCC 53993 Genome accession: NC_011206 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 598975 - 600465 bp Length : 1491 bp Strand : + Note : TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: mca:MCA0301 lysyl-tRNA synthetase DNA sequence : ATGGTGGATCAGGAACTCAATGACCAGATGCAGGTGCGGCGCGACAAGCTGGGACAGTGGCGCAGCGAAGGCCATGCCTA TCCCAACGGCTTCCGCCGCGATGCCCTGGCGGGCGACCTGCAAGAGCGTTATGGCGATATGGACGCCACGGCGCTGGAGC AGGAGCCCATCGAGGCACGGCTCGGCGGGCGGCTGATGAGCCGCCGGGTCATGGGCAAGGCCAGTTTCGCCGACATTCAG GATCAGTCCGGGCGTATTCAACTCTTTGTCAGCCGCGATAATCTGGGCGAAGAGGTCTACGCGCGCTTCAAGGGCCTGGA TTTGGGCGACATCATCGGTGTGGATGGTATCCTGTTCCGCACCAAGACCGGTGAATTGTCCCTGAAGGTGCATAGCCTCC AACTGCTGAGCAAGGCCCTGCGTCCGCTGCCGGAAAAATGGCACGGGCTCGCCGACCCGGAAACCCGCTTCCGCCAGCGC TATGTCGATCTGATCGTCACCGAGGCCACCCGCCGCACCTTCCAGATTCGTGCGGAAACGGTGGCGGCCCTGCGCGATGG TCTGCGCCAGCGCGGCTTTTATGAAGCGGAGACGCCCATGATGCAGCCCGTCCCCGGTGGTGCCACGGCGCGGCCCTTTG TCACCCACCACCATGCCCTCGACATGACCCTTTACCTGCGTATCGCCCCGGAGCTGTACCTCAAGCGGTTGGTGGTGGGC GGCATTGAGCAGGTCTTCGAGATCAACCGCAACTTCCGCAATGAAGGTATTTCCACCCGCCACAATCCCGAGTTCACCAT GCTCGAATGGTACGAGGCCTACGCCGACCACGTGCGCGCCATGGACCTCACCGAGACCCTGATCCGCGCCGCGGCACAGG CGGCCCTGGGCACCACGGCGATAAGCTATCAAGGGCTGGAGATCGACCTCGGCAAACCCTTCCACCGCCTGACGGTGACG GAATCGGTGCGTGCCCATAACCCCGATCTGGCGGATGCCGATCTGCGGGACCCCGCAGTGCTGGCCGCCAAGCTCGCGCA GTTGCACCTGCCCTGTCAGCCCGCCTGGGGCTGGGGCAAACGTCTCATCGAAATCTTCGAGAAGACGGTGGAAGGCCATC TCCAGCAGCCCACCTTCATCACCGAGTATCCCCTGGAGGTCAGCCCGCTGGCGCGCCGCAATGATCTCGACCCCGAGGTC ACGGATCGTTTCGAGCTGATGATCGCCGGCCGCGAGTTGGCCAACGGCTTCTCCGAGTTGAATGATCCCGAAGACCAGTC CGCCCGCTTCCGGGCGCAGGTCGAGGCTAAGGATGCCGGGGACGAGGAGGCGATGTTCTTCGACGCCGACTATATCCGTG CCCTGGAATATGGCATGCCGCCGACCGCAGGGGTGGGGCTGGGCATTGACCGTCTGGTCATGCTGCTTGCTGACCAGCCC AGCATTCGCGAGGTGATTCTCTTCCCCCATCTGCGGCCGGAACAGTCATGA Protein sequence : MVDQELNDQMQVRRDKLGQWRSEGHAYPNGFRRDALAGDLQERYGDMDATALEQEPIEARLGGRLMSRRVMGKASFADIQ DQSGRIQLFVSRDNLGEEVYARFKGLDLGDIIGVDGILFRTKTGELSLKVHSLQLLSKALRPLPEKWHGLADPETRFRQR YVDLIVTEATRRTFQIRAETVAALRDGLRQRGFYEAETPMMQPVPGGATARPFVTHHHALDMTLYLRIAPELYLKRLVVG GIEQVFEINRNFRNEGISTRHNPEFTMLEWYEAYADHVRAMDLTETLIRAAAQAALGTTAISYQGLEIDLGKPFHRLTVT ESVRAHNPDLADADLRDPAVLAAKLAQLHLPCQPAWGWGKRLIEIFEKTVEGHLQQPTFITEYPLEVSPLARRNDLDPEV TDRFELMIAGRELANGFSELNDPEDQSARFRAQVEAKDAGDEEAMFFDADYIRALEYGMPPTAGVGLGIDRLVMLLADQP SIREVILFPHLRPEQS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 4e-119 | 55 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Lferr_0640 | YP_002219100.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 2e-119 | 55 |
