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Name : Lferr_0550 (Lferr_0550) Accession : YP_002219011.1 Strain : Acidithiobacillus ferrooxidans ATCC 53993 Genome accession: NC_011206 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 508815 - 510080 bp Length : 1266 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTTGATCCCAGCTTGCTGCGCAGCTCCCCGGAAACCGTAGCTGCCGGCCTCGCTCGCCGCCACTTCACCCTCGATGT GGCTGCCCTGAATGCCCTCGATCAGCAGCGCAAAGCCCTGCAAATTCAGCTGGAACAGCTTCGCAACGCCCGCAATGAAG CTTCCAGACAGATCGGTCAGGCGCGCCGTCAGGGGCTCGATACCGGTGCGATGCAGGCCGCGGCAGCATCGAACGGCGAG GAGATCAAGACCCTGGAGCAATCACTGGAACGTACCCTTGCCGAATGGGATACGCTGACCATCGGTCTGCCCAACATCCC GCAGGATTCGGTGCCCGACGGCCGCGATGAAGCGGATAACGTAGTCCTGCGTCACTGGGGCTCGCCCAGCACCTTTGCTT TTCCGCCCCGCGACCACGTCGAACTGGGCGAGGCCCTGGGTATCATCGATTTTGCGGCGGGCGCACGCCTTGCCGGCACC CGTTTTGTGGTATTGCGTGGCGCCGGTGCCCGTCTCGAGCGCGCCCTGACGCAATTCATGCTGGATTTGCATACGACGGA ACACGGTTACACGGAAATCGCACCGCCTTTTCTCGCCAACGCCGATTCCTTGTATGGTACCGGGCAACTCCCCAAATTCG AAGAAGACCTCTTCGCCTTACGAGACGACCCCTATTACCTGATCCCCACCGCCGAAGTGCCGCTCACCAACCTGTTGCGT GGCGAGATCGTTGCCAGCCTGCCGCAGCGTTTCTGCGCCTACACCCCCTGTTTTCGCCGTGAAGCGGGGGCCTATGGGCG CGATACCCGCGGCATGATCCGCCAGCATCAGTTCGACAAGGTGGAACTGGTGCAGATCGTCCGCCCTGAAGATTCCGCTC AGGCCCACGAAACGCTCACCGCCCATGCCGAAAAGGTCTTGCAACTGCTGGAGCTGCCCTATCGCGTGACGGCTCTCTGC GCCGGCGATCTGGGCTTCAGTGCTGCCAAAACCTATGATCTCGAAGTCTGGCTGCCGGGCCAGAATCAGTACCGAGAAAT CAGCTCTTGCAGCAATTTCGAAAGCTTTCAGGCGCGTCGCCTGCAATTGCGCTATCGTGCCGAAGACGGCAAGCCGCAAC TCGTCCATACCCTCAATGGCTCCGGACTCGCCGTCGGCCGCACCCTGGTTGCGCTTCTGGAAAACCATCAACAGGCCGAT GGCCGTATTCGTATTCCCGCCGCCCTGCGTCCCTACCTCGGCGGGATGACCGTCATTCAGGCGTGA Protein sequence : MLDPSLLRSSPETVAAGLARRHFTLDVAALNALDQQRKALQIQLEQLRNARNEASRQIGQARRQGLDTGAMQAAAASNGE EIKTLEQSLERTLAEWDTLTIGLPNIPQDSVPDGRDEADNVVLRHWGSPSTFAFPPRDHVELGEALGIIDFAAGARLAGT RFVVLRGAGARLERALTQFMLDLHTTEHGYTEIAPPFLANADSLYGTGQLPKFEEDLFALRDDPYYLIPTAEVPLTNLLR GEIVASLPQRFCAYTPCFRREAGAYGRDTRGMIRQHQFDKVELVQIVRPEDSAQAHETLTAHAEKVLQLLELPYRVTALC AGDLGFSAAKTYDLEVWLPGQNQYREISSCSNFESFQARRLQLRYRAEDGKPQLVHTLNGSGLAVGRTLVALLENHQQAD GRIRIPAALRPYLGGMTVIQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 7e-105 | 54 |
