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Name : Lferr_0473 (Lferr_0473) Accession : YP_002218934.1 Strain : Acidithiobacillus ferrooxidans ATCC 53993 Genome accession: NC_011206 Putative virulence/resistance : Unknown Product : riboflavin biosynthesis protein RibD Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG1985 EC number : 1.1.1.193 Position : 445532 - 446605 bp Length : 1074 bp Strand : + Note : KEGG: tbd:Tbd_2168 riboflavin biosynthesis protein RibD diaminohydroxyphosphoribosylaminopyrimid ine deaminase + 5-amino-6-(5-phosphoribosylamino)uracil reductase oxidoreductase protein; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deamin DNA sequence : ATGAGTGAGGCTCTGGTGCTTGCGGAACAGGGCCTGTACAGCGCGCACCCCAATCCCTGTGTTGGGGCTGTTCTGGTGAA AGATGGACGCGTCATCGGGCGGGGTGCTCATCTGCAAGCCGGTGAGCCGCATGCGGAGGTTCTCGCGCTGAAGGAGGCGG GTGCTGCTGCGCGCGGCGCTACGGCTTATGTGACTCTGGAGCCTTGCAGTCACTATGGCCGTACGCCGCCCTGTGCAGAT GCGCTGATTGCCGCGGGTATCGCGCGGGTGGTGATTGCCATGCGCGACCCCAACCCTCTGGTGGCGGGGCGCGGCGTGGA ACGTCTGCGCGCCGCCGGCGTGGTGGCCGAGGAGGGTTGCCTGGAAGCGGCGGCAGAAGCCTTGAATCCTGGATTTCTGC GACGGATGCGCCACGGCCGCCCCTGGCTGCGGCTCAAGCAGGCCATGAGTCTGGATGGCCGGGTGGCGCTCGCCAACGGG CGAAGCCAATGGCTGACGGGGGAGGCGGCGCGTGCGGATGTGCAGCAGGAGCGGGCGCGCGCCAGTGCCATCCTTGTCGG CATCGGCACGGTGCTGGCCGATAATCCGCGCCTCGCACCACGCCTGGAAGCTCCCCTGCGGCGCTATCCGGTGAAAGTCA TCATGGACAGCCATCTGCGCACGCCGCCGGATGCGGCGCTTTTTGGTACACCTGGTGCGGTATGGATTTTTCATGGGCAG GATGCTCCTGTTGCCGCCCGGGCGGCGCTATGCGCTGCCGGTGCGGAGTTGCTGTTCTGTCGCGGCACGGTACAGGGACT GGACTGGCAGGAAGTGATGGGCATGCTGGCAGAGCGGCAGATCAACGAGGTGCTGGTCGAAGCGGGGCCTGGCGTCGCTG CTTCCCTGTTCGCCGCTGGCCTGATCGACGAATGGCTGCTTTATGTGGCCCCGCTGCTGCTCGGGCTGGATGCACGGCCA GTGCTCGCCACCGGCCCCTATTCGGATCTCGCGGAGGTGCCGCGCTGGTCGGTGATCCAAAGCTCCCGATTGGGCAACGA TATCAAGTGGACATTGCGTCCACAGGAGCGATAG Protein sequence : MSEALVLAEQGLYSAHPNPCVGAVLVKDGRVIGRGAHLQAGEPHAEVLALKEAGAAARGATAYVTLEPCSHYGRTPPCAD ALIAAGIARVVIAMRDPNPLVAGRGVERLRAAGVVAEEGCLEAAAEALNPGFLRRMRHGRPWLRLKQAMSLDGRVALANG RSQWLTGEAARADVQQERARASAILVGIGTVLADNPRLAPRLEAPLRRYPVKVIMDSHLRTPPDAALFGTPGAVWIFHGQ DAPVAARAALCAAGAELLFCRGTVQGLDWQEVMGMLAERQINEVLVEAGPGVAASLFAAGLIDEWLLYVAPLLLGLDARP VLATGPYSDLAEVPRWSVIQSSRLGNDIKWTLRPQER |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00289 | YP_008207754.1 | Pyrimidine deaminase | Not tested | AbaR25 | Protein | 5e-41 | 44 |
| BJAB0868_00293 | YP_008211619.1 | Pyrimidine deaminase | Not tested | AbaR26 | Protein | 5e-41 | 44 |
