Gene Information

Name : Lferr_2875 (Lferr_2875)
Accession : YP_002221266.1
Strain : Acidithiobacillus ferrooxidans ATCC 53993
Genome accession: NC_011206
Putative virulence/resistance : Unknown
Product : argininosuccinate lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0165
EC number : -
Position : 2858252 - 2859640 bp
Length : 1389 bp
Strand : +
Note : TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; KEGG: noc:Noc_0501 argininosuccinate lyase

DNA sequence :
ATGAGTGAAAAAATGTGGGGTGGGCGCTTCGCGGCGGGCACCGACCGTCTGGTCGAGGCCTTTACGGCATCCATCCAGGT
GGACCGTCGTCTGTACGCGGAGGACATCCGTGGTTCCATGGCTCATGCCCGCATGCTGGGCCGGGTGGGCGTGCTGACGG
AAGCGGAGGTGGAGGCCATCGTCACCGGGCTGGCGCAGGTGCGGCAGGAGATCGTCGAAGACCGGCTGCCTTTTGTGGAT
GCCCTGGAAGACATCCACATGCACGTCGAGTCGCGCCTCACCGAAATCATCGGCGACGTCGGCAAGAAGCTCCACACCGG
CCGTTCCCGCAACGATCAGGTGGCCACCGACCTGCGCCTTTATACCCGCGGCGGCCTGGATGACCTCGTCCGGGGGCTGC
AGCACCTGCAAAACGTCTTCATCGACCTCGCCGAGCGGGAGGTGGAGACCATCCTCCCGGGTCTGACCCACATGCAGGTG
GCCCAACCGATCAGCTTTGGTCACCATTGTATGGCCTACGTGGAGATGTTCCACCGCGATACCCAGCGTCTGCTCGATGC
ACGACGGCGGGTGAACGTGCTGCCCCTGGGCGCGGCGGCGCTGGCGGGGACGACCTTTCCCATCGACCGCTGGGACGTGG
CGCGTCAGCTCGGCTTTGAGGCCGTCGCCGAAAACAGCCTCGATGCCGTCTCCGACCGCGACTTTGTGATGGAAGTGTTA
TCGGATCTGGCCATCCTCGCCGTCCACCTCTCGCGGCTGTCGGAAGAGTTGATCCTGTGGATGTCGGCCCCCTTCGGCTT
CATCGACCTGCCCGACGGCTTCTGTACCGGCTCCAGCATCATGCCACAAAAGAAAAACCCGGATGTCGCGGAAATCATTC
GTGGCAAGAGTGGGCGGGTGATCGGCGATCTTGTCGCTATCCTCGTTCTCATGAAGGGCCAGCCCCTCGCCTACAACCGC
GACAATCAGGAAGACAAGGAAACCCTTTTCGACGCCCTTGACCAGATGCGCGCCAGCGTGGAGATCATGGGCCGGATGCT
GCCGGGCCTGCAGACCCGTCCCGACGTCATGCGCGCGCAGGCGGAACGCGGCTTTGCCACCGCCACCGATCTGGCCGATT
ATCTGGTGCGCAAGGGACTGCCTTTCCGTGATGCCCACGCCGTGGTGGGCCGTGCCGTGCGCCTGGCCCAGGAACGCCAC
ATCGGCCTGGAGGCCCTGCCGCTGGCGGATTTGCAGGCGCTGTCACCGCTCATCGACGGGGAGGTCTATGCGGTGCTGGT
GCTGGAAGGCTCCCTGGCGGCGCGGGATCACTTGGGCGGTACGGCACCCCGGCAGGTGCAGGCCGCCATCCAGCGCGCCC
GAGAGCGCCTGCAGCGGGAGGCCCTGTGA

Protein sequence :
MSEKMWGGRFAAGTDRLVEAFTASIQVDRRLYAEDIRGSMAHARMLGRVGVLTEAEVEAIVTGLAQVRQEIVEDRLPFVD
ALEDIHMHVESRLTEIIGDVGKKLHTGRSRNDQVATDLRLYTRGGLDDLVRGLQHLQNVFIDLAEREVETILPGLTHMQV
AQPISFGHHCMAYVEMFHRDTQRLLDARRRVNVLPLGAAALAGTTFPIDRWDVARQLGFEAVAENSLDAVSDRDFVMEVL
SDLAILAVHLSRLSEELILWMSAPFGFIDLPDGFCTGSSIMPQKKNPDVAEIIRGKSGRVIGDLVAILVLMKGQPLAYNR
DNQEDKETLFDALDQMRASVEIMGRMLPGLQTRPDVMRAQAERGFATATDLADYLVRKGLPFRDAHAVVGRAVRLAQERH
IGLEALPLADLQALSPLIDGEVYAVLVLEGSLAARDHLGGTAPRQVQAAIQRARERLQREAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00324 YP_008207789.1 Argininosuccinate lyase Not tested AbaR25 Protein 4e-128 60
BJAB0868_00328 YP_008211654.1 Argininosuccinate lyase Not tested AbaR26 Protein 4e-128 60