|
Name : Lferr_2757 (Lferr_2757) Accession : YP_002221155.1 Strain : Acidithiobacillus ferrooxidans ATCC 53993 Genome accession: NC_011206 Putative virulence/resistance : Resistance Product : D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit Function : - COG functional category : C : Energy production and conversion COG ID : COG1052 EC number : - Position : 2742201 - 2743196 bp Length : 996 bp Strand : - Note : PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: rca:Rcas_0709 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding DNA sequence : ATGCGTTGTCTGGTGACCAGTGCTCGCCCTTACGATGAACAATTCCTCAGCGCCGCCAACCATGGACGCCACGAATTGGT ATTTGTTGAAACCGCACTGAGCGCGGATACGGCTTTTATTGCCCAGGGATACCCTGCCATTTGCCCCTTCGTGGATGACA CGCTGGACGCAAAAACACTGGAAACCATAGCGCGCTTGGGGACTAAACTACTGGTCTTGCGCAGCACCGGGTTCAATCAT GTGGACATGCCTGCGGCCGAGAAGTACGGCATCACCGTCATGCGGGTACGCGATTATTCCCCTTATGCGGTGGCTGAATA TGCCGTCGGCCTGATGTTGACCCTGAACCGACACCTGCATAAAGCCTATAACCGGGTGCGTGACGGTAATTTTCTCCTCG ACGGCTTGCTGGGTTTTGACATGCATGGCAAAACCGTAGGCATTATCGGCACTGGAAAAATTGGCCAGGCACTCGCCCGG ATTCTGCATGGTATGGGCTGCCACTTGTTGGGCTACGACACAGTCGCCAATCCCGCGTGCCTGGAACTCGGCGTTGCATA TGTACCGCTGGAAGAATTGCTCGTCAAAAGCCAAATCGTCAGCCTCCATGTGCCGCTGCTCCCGGAAACCCGGCATCTGA TGAATGCGGAACGGTTCGCCTTGATGCCGGACGGTGCCATGCTGATCAATACCAGCCGTGGTCCGCTCATCGACACCACG GCACTCATTGCGGCACTGAAAAGCCGCCATCTGGGTGCTGTGGGTCTGGATGTCTATGAAGAAGAGGCAGAATTATATTT TAAGGATCATTGCGATGACATTATCTGCGATGACAGCTTCGAACGGCTGCTCACTTTTCCCAATGTCATCATCACGGGCC ATCAGGCCTTTTTTACCAGTGAGGCACTGACCACCATTGCCAGGACCACGATCCAGAACCTGGATGACTACAGCGATGGA AAGGATAATCCCAATTGCGTTCGCAGCAAGGGATGA Protein sequence : MRCLVTSARPYDEQFLSAANHGRHELVFVETALSADTAFIAQGYPAICPFVDDTLDAKTLETIARLGTKLLVLRSTGFNH VDMPAAEKYGITVMRVRDYSPYAVAEYAVGLMLTLNRHLHKAYNRVRDGNFLLDGLLGFDMHGKTVGIIGTGKIGQALAR ILHGMGCHLLGYDTVANPACLELGVAYVPLEELLVKSQIVSLHVPLLPETRHLMNAERFALMPDGAMLINTSRGPLIDTT ALIAALKSRHLGAVGLDVYEEEAELYFKDHCDDIICDDSFERLLTFPNVIITGHQAFFTSEALTTIARTTIQNLDDYSDG KDNPNCVRSKG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF2295 | NP_815952.1 | D-specific alpha-keto acid dehydrogenase | Not tested | Not named | Protein | 3e-33 | 42 |
| vanHB | YP_008394258.1 | VanH protein, D-specific alpha-keto acid dehydrogenase | Not tested | Not named | Protein | 8e-34 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Lferr_2757 | YP_002221155.1 | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit | AF310956.2.orf4.gene | Protein | 4e-34 | 42 |
| Lferr_2757 | YP_002221155.1 | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit | U35369.1.gene5.p01 | Protein | 2e-33 | 42 |
| Lferr_2757 | YP_002221155.1 | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit | NC_014475.1.orf2.gen | Protein | 2e-30 | 42 |
| Lferr_2757 | YP_002221155.1 | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit | NC_005054.2598279.p0 | Protein | 2e-30 | 42 |
