Gene Information

Name : Lferr_2576 (Lferr_2576)
Accession : YP_002220977.1
Strain : Acidithiobacillus ferrooxidans ATCC 53993
Genome accession: NC_011206
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1134
EC number : -
Position : 2547586 - 2548239 bp
Length : 654 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bch:Bcen2424_0776 ABC transporter related

DNA sequence : 
ATGATTGAGCTTTGTGAAGTGACCAAGACCTACCCTATCTATCATGGCCATGCGCAACGGACCATTTTGGATAGGATAAA
TTTGCGTGTAGGGAAGGGCCAAAAATGGGGCATCCTCGGGCGGAACGGGGCGGGTAAATCGACGCTTATCCGACTCATCA
GTGGTGCAGAAAGGCCTAATACCGGCAATATCGTCAGAAACATGACCGTATCCTGGCCCTTGGCTTTTGGTGGAGCTTTT
CAGGGCAGCCTCACGGGGCGGGACAATACCCGCCTCATTTGCCGAGCTTACGGGGTGGATTTTGATAAAACCATAACTAT
GGTGGAAAACTTCGCAGAGCTTGGTAGTTATCTGTGGGAACCGGTTAAATCTTATTCATCTGGCATGTCGGCACGACTAG
CCTTTGCTATCTCCATATCTGTGGAGTTTGATTGTTTTCTCATCGATGAGGCGCTGGCCGTTGGTGATCACCGGTTCCTC
CAGAAATGTAATGTAGAATTATTTGAAAATCGTGGCGATCGCGCCATGATCATCGTCTCCCATCAGACAAATATTATCCG
GACCCACTGTGATCATGCCGCCGTATTGGAAAATGGCCATCTGACGGTACATGAAAGCGTGGATTCTGCCATTGCTGCGT
ACGAGGCGCTCTGA

Protein sequence : 
MIELCEVTKTYPIYHGHAQRTILDRINLRVGKGQKWGILGRNGAGKSTLIRLISGAERPNTGNIVRNMTVSWPLAFGGAF
QGSLTGRDNTRLICRAYGVDFDKTITMVENFAELGSYLWEPVKSYSSGMSARLAFAISISVEFDCFLIDEALAVGDHRFL
QKCNVELFENRGDRAMIIVSHQTNIIRTHCDHAAVLENGHLTVHESVDSAIAAYEAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ctrD NP_273138.1 capsule polysaccharide export ATP-binding protein CtrD Not tested IHT-A Protein 2e-58 62
kpsT YP_854396.1 polysialic acid transport ATP-binding protein KpsT Not tested PAI I APEC-O1 Protein 7e-39 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Lferr_2576 YP_002220977.1 ABC transporter-like protein VFG0258 Protein 7e-59 62
Lferr_2576 YP_002220977.1 ABC transporter-like protein VFG0696 Protein 2e-56 60
Lferr_2576 YP_002220977.1 ABC transporter-like protein VFG2563 Protein 6e-59 58
Lferr_2576 YP_002220977.1 ABC transporter-like protein VFG1449 Protein 2e-39 41