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Name : Lferr_2479 (Lferr_2479) Accession : YP_002220881.1 Strain : Acidithiobacillus ferrooxidans ATCC 53993 Genome accession: NC_011206 Putative virulence/resistance : Resistance Product : arsenical pump membrane protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1055 EC number : - Position : 2444365 - 2445675 bp Length : 1311 bp Strand : - Note : TIGRFAM: arsenical pump membrane protein; PFAM: Arsenical pump membrane protein; Citrate transporter; KEGG: mex:Mext_1911 arsenical pump membrane protein DNA sequence : ATGCTGGCCGTCGCCATATTTCTCGTCACCCTGATTCTCGTCATCTGGCAACCCAAGGGCCTCAGCATCGGCTGGAGCGC CATGGGTGGCGCTGTCGTGGCGCTGGCCACCGGCGTCATCACCTGGAGTGACATTCCCATTGTCTGGCACATTGTCTGGG ATGCCACCTTTACCTTTGTGGCCTTGATTATCATCTCGCTGATCCTCGATGAGGCAGGATTTTTTCACTGGGCGGCACTG CATGTGGTTCGCTGGGGTGGTGGTCGCGGGCGCCTGCTCTTTCCTTTGATCGTCGTGCTGGGGGCCATGATTGCTGCGGT GTTCGCCAACGACGGCGCGGCGTTGCTGCTCACCCCGATCGTCATGGCCATATTGCTGCGCCTGGATTTCACCCCGGCGG CCACCTTTGCCTTTGTCATCGCCACGGGTTTCGTGGCCGATACCACCAGCCTGCCGCTGATGATTTCCAATCTGGTGAAC ATTGTCAGTGCCAATTATTTCAACATCAGTTTTGACCGTTATGCGACGGTGATGGTGCCCGTGGATCTGGTGGCCCTGGC GGCGACGCTGGGCGTGCTCTGGCTCTATTTCCGGCGGGTGGTGCCACGCCGATATCTGACCCGTGACCTGCCCGAACCTG CTTCTGTCATCATGGATCACGTGGTTTTTCGGGCCAGTTTCCCGGTTCTGATTCTGTTGTTGGTGGCCTATTTTGTCACT GCGCAATGGCAGGTTCCGGTCTCCGTGGTGACCGGAACCGGTGCGTTGATCCTGTTGGCTCTGGCCGGGCGTTGGCTACA GGGCGGGCGCGGCGCGCGGATTCCCGTGCGCAAAGTGCTGCGGGAAGCCCCTTGGGCGATCGTGGTCTTCAGTCTGGGTA TGTATCTGGTGGTTTATGGATTACGCAACGCCGGACTCACCAGTTATGTGGCCATGGCCCTGCACTGGTTTGCTGGTCAC GGGACCGTAGCAGCGGCGCTGGGCACGGGGTTTCTCGCGGCCCTGCTGTCTTCCATCATGAACAATATGCCAGCGGTACT GGTGGGAGCGCTGGCTATCCATCAACTGTCCTCGGTAGCAACAGACCCCTTGCTCCGGGAGATCATGGTCTACGCCAATG TTATCGGCTGTGATCTCGGCCCCAAGTTTACCCCGATCGGCAGCCTGGCGACCCTGCTCTGGCTGCATGTGCTGAGTCGC AAAGGTATGACCGTGACCTGGGGACAGTACATGAGAACGGGTCTGCTCATTACCCCGCCGGTACTGCTGGTCACGCTACT GGCCCTGGCCTGGTGGCTGCCGCTGGCTTGA Protein sequence : MLAVAIFLVTLILVIWQPKGLSIGWSAMGGAVVALATGVITWSDIPIVWHIVWDATFTFVALIIISLILDEAGFFHWAAL HVVRWGGGRGRLLFPLIVVLGAMIAAVFANDGAALLLTPIVMAILLRLDFTPAATFAFVIATGFVADTTSLPLMISNLVN IVSANYFNISFDRYATVMVPVDLVALAATLGVLWLYFRRVVPRRYLTRDLPEPASVIMDHVVFRASFPVLILLLVAYFVT AQWQVPVSVVTGTGALILLALAGRWLQGGRGARIPVRKVLREAPWAIVVFSLGMYLVVYGLRNAGLTSYVAMALHWFAGH GTVAAALGTGFLAALLSSIMNNMPAVLVGALAIHQLSSVATDPLLREIMVYANVIGCDLGPKFTPIGSLATLLWLHVLSR KGMTVTWGQYMRTGLLITPPVLLVTLLALAWWLPLA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| arsB2 | YP_001007633.1 | arsenical pump membrane protein | Not tested | YAPI | Protein | 2e-101 | 63 |
| arsB | YP_252017.1 | arsenical pump membrane protein | Not tested | SCCmec | Protein | 5e-90 | 53 |
| SH0109 | YP_252024.1 | arsenical pump membrane protein | Not tested | SCCmec | Protein | 3e-90 | 53 |
| arsB | YP_005754065.1 | arsenical pump membrane protein | Not tested | Type-XI SCCmec | Protein | 9e-89 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Lferr_2479 | YP_002220881.1 | arsenical pump membrane protein | BAC0578 | Protein | 4e-101 | 63 |
| Lferr_2479 | YP_002220881.1 | arsenical pump membrane protein | BAC0576 | Protein | 7e-101 | 62 |
| Lferr_2479 | YP_002220881.1 | arsenical pump membrane protein | BAC0577 | Protein | 1e-101 | 62 |
| Lferr_2479 | YP_002220881.1 | arsenical pump membrane protein | BAC0031 | Protein | 8e-97 | 62 |
| Lferr_2479 | YP_002220881.1 | arsenical pump membrane protein | BAC0575 | Protein | 1e-91 | 54 |
| Lferr_2479 | YP_002220881.1 | arsenical pump membrane protein | BAC0574 | Protein | 1e-89 | 53 |
