Gene Information

Name : Lferr_2466 (Lferr_2466)
Accession : YP_002220868.1
Strain : Acidithiobacillus ferrooxidans ATCC 53993
Genome accession: NC_011206
Putative virulence/resistance : Unknown
Product : ssDNA-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 2431362 - 2431832 bp
Length : 471 bp
Strand : -
Note : TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: mfa:Mfla_2424 single-strand binding protein

DNA sequence :
ATGGCGGGAGTGAACAAGGTCATATTGTTGGGGCATCTGGGACGGGACCCGGAGATGCGTTATCAGCCCAGTGGCGGCGC
CATCGCGAACTTCAGCATCGCGACTTCCGAGACCTTCAAGGACAAGGAAGGCAACAAGCAGGAGCGCACCGAATGGCATC
GCGTCGTGCTCTTCGGACGCACTGCGGAAATCGCCGGCGAATATCTGCGCAAGGGCAGCATGGCCTATGTGGAAGGCCGC
CTGCAGACGCGCAAGTGGACCGACAAGGAAGGGCAGGAGCGTTACACCACGGAGATCGTGGGAGACCGTCTGCAACTGGT
GGGCGCGCGTGGGGGCGGTGGCGGCGGCGCGGCCAGCTTCGATGAGGAAGATCCGTCCCGGCCGAGTGGCGGCAGCAGTG
CCGGGGGCGCGCGGAAAAATGAGATGCCGCCCGCGCCGGCGGAGGATTTTGATGATGATATTCCGTTCTGA

Protein sequence :
MAGVNKVILLGHLGRDPEMRYQPSGGAIANFSIATSETFKDKEGNKQERTEWHRVVLFGRTAEIAGEYLRKGSMAYVEGR
LQTRKWTDKEGQERYTTEIVGDRLQLVGARGGGGGGAASFDEEDPSRPSGGSSAGGARKNEMPPAPAEDFDDDIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssB NP_458627.1 single strand binding protein Not tested SPI-7 Protein 3e-31 55
ssb NP_807839.1 single-stranded DNA-binding protein Not tested SPI-7 Protein 3e-31 55
ssb AAF14810.1 single strand binding protein Not tested SPI-7 Protein 2e-31 55
ssb1 YP_005176252.1 single-stranded DNA-binding protein Not tested ICEPmu1 Protein 5e-30 50