Gene Information

Name : Lferr_2400 (Lferr_2400)
Accession : YP_002220804.1
Strain : Acidithiobacillus ferrooxidans ATCC 53993
Genome accession: NC_011206
Putative virulence/resistance : Unknown
Product : IstB domain-containing ATP-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 2365614 - 2366441 bp
Length : 828 bp
Strand : -
Note : PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: eba:p1B267 transposition helper protein

DNA sequence : 
ATGAACCCGAGCACGCTCGCCCGACTTCCCATGATGCTCACCGATCTGCGCTTGCCAACCATGAAACAGGCTTGGCAAGG
CCTCGCCACAAAGTCCAATCAGGAAGACTGGCCCGCCGAGCGCTTCCTGGCGACCCTTCTGGAACAGGAAATCCTGGGGC
GGGAGGCACGGCGTTTGGAACGTCGTCGCCAGGAATCCAACCTGCCACCGGATAAGCGGCTGGGAAACTATGACTTCACG
GTGGTTCCCACGCTCTCCAAAGCCCATGTGCAAGCCTTGGCCGAGGCGGATGGATGGATCCAGGAAGGGGCCAACCTGCT
GCTCTTCGGCCCGCCTGGTGTCGGCAAAAGCCATTTGGTGGCCGCTGTGGGGCATGCCCTAGTGGAACGGGGGTGTCGGG
TATACTTCACACGGACCAGCGATTTGGTTCAGCAGTTACAATCCGCGCGCAAGGAGCTCCGATTGCCGGCCACTCTGGCC
AAGCTGGACCGCTTTGACCTACTGATTTTGGATGACTTCAGCTATGTTCGCCGGGATCAGGCCGAGACCTCGGTGCTCTT
CGAACTGATCTCGGAACGCTATGAACGGAAAAGTCTGGCCATCACAGCCAATCAACCCTTCTCTGCATGGGATCAGGTCT
TCCCGGAGGCTGCCATGACCGTGGCCGCCGTGGATCGTCTGGTCCACCGCTCCACCATCTTGGAGCTCCATGCAGAAAGC
TACCGGCGCCGGACGGCCAAGAATCGCGCAAACGTCACCGTGACAACCAAGGAGGTAAAGCGCGACCTGGAAGAAACGGA
CTCACAGGATGGTGTAGTATCACAGTAA

Protein sequence : 
MNPSTLARLPMMLTDLRLPTMKQAWQGLATKSNQEDWPAERFLATLLEQEILGREARRLERRRQESNLPPDKRLGNYDFT
VVPTLSKAHVQALAEADGWIQEGANLLLFGPPGVGKSHLVAAVGHALVERGCRVYFTRTSDLVQQLQSARKELRLPATLA
KLDRFDLLILDDFSYVRRDQAETSVLFELISERYERKSLAITANQPFSAWDQVFPEAAMTVAAVDRLVHRSTILELHAES
YRRRTAKNRANVTVTTKEVKRDLEETDSQDGVVSQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3608 NP_755483.1 hypothetical protein Not tested PAI I CFT073 Protein 2e-46 45
c5145 NP_756993.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-46 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Lferr_2400 YP_002220804.1 IstB domain-containing ATP-binding protein VFG1729 Protein 8e-47 45