Gene Information

Name : Lferr_2132 (Lferr_2132)
Accession : YP_002220544.1
Strain : Acidithiobacillus ferrooxidans ATCC 53993
Genome accession: NC_011206
Putative virulence/resistance : Unknown
Product : TniB family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2119232 - 2119843 bp
Length : 612 bp
Strand : -
Note : PFAM: TniB family protein; KEGG: psp:PSPPH_0182 transposition helper protein, truncated

DNA sequence :
ATGATGGACCTTACTCATATTCATCCGGAATTCCGCCATATTTTGGGCATGTCGGATAAGGACCGCATGGCATTTCTCGA
CGAGCCGCGCTGGATAGGTTACGCCCAGGCTAATCGCCTTTTGGATAACTTGCGCAGTTTAATGGAAAAGCCCGTGCGCC
CACGTATGCCTAATCTGTTGATCGTTGGTGATTCCAACAATGGCAAGACAACGGTTATTCGGCGTTTTCAGAAGTTGCAT
GGAGAGGGCTACGTTAATGAGGATGCGGAACCCGTCAAACCGGTTATTGTAAGCGAAGCGCCGCCCAGCGCGGACGAAAA
GGGGTTGTATATAGCGATCCTGGAGCGTTTCTGGACACCGTACCGAGCGACGGATTCTGCTTCTAAGCTGCGCTACCAGG
TGGTTCATCTGATGCGAGACTGCCATGTGCGTATCCTGGTTATCGACGAATTTCACTCTCTCCTGACGGGGACGGTGACT
AAACAACGCGAGGTCATGAACGCCATCAAGCTGCTATGCAACGAATTGGCGATCCCCATCGTTGGCGTGGGCATCAGAGA
GGCCGTCCGGGTTTTGCACACGGACCCACAGCCAGGGCCATGTCAACCTTAG

Protein sequence :
MMDLTHIHPEFRHILGMSDKDRMAFLDEPRWIGYAQANRLLDNLRSLMEKPVRPRMPNLLIVGDSNNGKTTVIRRFQKLH
GEGYVNEDAEPVKPVIVSEAPPSADEKGLYIAILERFWTPYRATDSASKLRYQVVHLMRDCHVRILVIDEFHSLLTGTVT
KQREVMNAIKLLCNELAIPIVGVGIREAVRVLHTDPQPGPCQP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ABTW07_0227 YP_005797114.1 putative transposition helper protein Not tested AbaR4e Protein 6e-24 42
ABK1_0236 YP_005512808.1 Transposition Helper Not tested AbaR4d Protein 7e-24 42
BJAB07104_00271 YP_008207736.1 hypothetical protein Not tested AbaR25 Protein 7e-24 42
BJAB0868_00275 YP_008211601.1 hypothetical protein Not tested AbaR26 Protein 7e-24 42