Gene Information

Name : Lferr_2101 (Lferr_2101)
Accession : YP_002220517.1
Strain : Acidithiobacillus ferrooxidans ATCC 53993
Genome accession: NC_011206
Putative virulence/resistance : Unknown
Product : K+-transporting ATPase subunit B
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2216
EC number : -
Position : 2093910 - 2095979 bp
Length : 2070 bp
Strand : -
Note : TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; K+-transporting ATPase, B subunit; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: eca:ECA1341 potassium-transporting ATPase subunit

DNA sequence :
ATGGAATCTACCCATCATAAACATGCGGCATCTCCGATCAACTGGAAAGATCAGGGCCGGGGCGCCCTGTGGGACAGCTT
CAGCATGCTCTCCCCGCGTCGCCAGTTGCGCAATCCGGTGATGTTCGTCGTCTACGTCGGCTCCTGGCTGCTGCTGGCCC
TCTTTTTTCACGATCTAATCGTGCATAACAGTGAAGCGCCTTTTACCGCTGTGATCGACCTCTGGCTCTGGCTCACACTG
ATTTTTGCCAATTTTGCCGAAGCGCTGGCCGAGCGTCAGGGCGAGGCCCAGGCCAACAGTTTGCGGCAGAGCCGGCAGGA
AGTTACGGCCAAAAAACTGCCGAAACCGGTGCGCGAGGCGAGCTATAAGGAGGTTCCCGGCGCCAGCCTGCGCAGCGGCG
ACTTTGTCCTGATAGAAGCGGGAGACCTCGTCCCCACCGACGGCGAGGCGGTGGCGGGAGTCGCCGCCGTCGATGAAAGC
GCCATCACGGGCGAGAGCGCGCCCGTCATCCGCGAAAGCGGGGGTGATCGTAGCGCGGTCACCGGCGGTACCCGGGTGAT
CTCGGACTGGCTCATCATCCGGGTGACGCAGGAGGCCGGACACACCTTCCTCGACAAAATGATCGCCATGGTGGAGGGGG
CATCGCGACGCAAAACCCCTAACGAAATCGCTCTAAGCATACTGTTGGTCGTTTTGACGCTCGTTTTTCTGGTGGTCACC
GTCACCATTTATCCGTTTTCCTGGTATAGCGTCCATTACGCCAGCCACTCCGGATCGGTGATCAGCCTGACGGTGCTGGT
AGCCTTGCTGGTCTGCCTGATTCCCACCACCATCGGAGCGCTATTACCCGCTATCGGTATTGCCGGCATCGTGCGCTTGC
TGCAGAGCAATGTGGTGGCGACTTCCGGGCGTGCCATCGAGGCGGCGGGTGACGTGGATGTGCTGCTTCTCGATAAAACC
GGCACCATTACCTACGGCAACCGATCCGCAGCGGCGTTTTACCCCGTTTTAGCGGTTACCCAGGAAATCCTCGCGCAGGC
GGCCCGCCGCGCCTCTTTGGCCGATGAGACGCCGGAGGGCAAAAGTATCGTGACCCTTGCCGACAAACATTACCCGCAAA
GCCGGGAAGCCTTGCCACTGGAAGCCCAATTGATCCCTTTTACTGCCGAAACCCGCATGAGTGGGGTGGACTGGAATGGG
CAGCAATTGCGTAAGGGATCTCCCGACGCCATGAAGGCGTGGGTCCAGTCGCTGGGGGGCACCTGGCCTAACGAGCTGGA
CGGCATAGTGCAGGAAATCGCGGGGGGTGGCGCAACACCCCTGGTGGTCTGCTCTGGCGCAGCGGTATTGGGTGCCATCG
AGTTGCGGGACATCGTCAAAGCCGACATCAAATCGCGCTTTGCCGAATTGCGGGCGATGGGTATCCGCACCGTCATGGTG
ACCGGCGACAATCCGTTGACTGCCGCCGCCATTGCCGCTGAAGCGGGGGTCGATGATTATCTCGCGGAAGCCAAACCGGA
AACCAAGCTCGCGCGCATTCGAGAATACCAGAATGAGGGTTACATGGTCGCGATGACCGGGGACGGCACCAACGATTCCC
CAGCCCTGGCCCAGGCGGATGTCGGTCTCTGCATGGCCAGTGGTACCCAGGCGGCGCGCGAAGCCTCCAACATGGTCGAC
TTGGACTCCAATCCCACCAAACTGCTGGAGATCGTCCAGATCGGCAAGCAACTGCTGATGACCCGCGGCGCCCTCACCAC
CTTCAGTGTGGCGAACGATGTGGCCAAATACTTCGCCATCATCCCGGCGGCGTTTGTATCGACTTATCCCCAATTGGGCG
AGCTGAACATCATGGATTTGAGCTCGCCTACCCATGCCATCATGGCCGCAGTCATCTTTAACGCGCTCATCATCCCCTTT
CTGATTCCACTGGCCCTCAAGGGGATCAAGTTCCGCGCGGACTCGGCGCAGCACATCCTGCGCCGCAACGTGTGGATCTA
CGGATTGGGCGGCATTATTGCGCCATTTATCTTCATCAAGCTGATCGACATGCTGCTGGTTGTACTGTAG

Protein sequence :
MESTHHKHAASPINWKDQGRGALWDSFSMLSPRRQLRNPVMFVVYVGSWLLLALFFHDLIVHNSEAPFTAVIDLWLWLTL
IFANFAEALAERQGEAQANSLRQSRQEVTAKKLPKPVREASYKEVPGASLRSGDFVLIEAGDLVPTDGEAVAGVAAVDES
AITGESAPVIRESGGDRSAVTGGTRVISDWLIIRVTQEAGHTFLDKMIAMVEGASRRKTPNEIALSILLVVLTLVFLVVT
VTIYPFSWYSVHYASHSGSVISLTVLVALLVCLIPTTIGALLPAIGIAGIVRLLQSNVVATSGRAIEAAGDVDVLLLDKT
GTITYGNRSAAAFYPVLAVTQEILAQAARRASLADETPEGKSIVTLADKHYPQSREALPLEAQLIPFTAETRMSGVDWNG
QQLRKGSPDAMKAWVQSLGGTWPNELDGIVQEIAGGGATPLVVCSGAAVLGAIELRDIVKADIKSRFAELRAMGIRTVMV
TGDNPLTAAAIAAEAGVDDYLAEAKPETKLARIREYQNEGYMVAMTGDGTNDSPALAQADVGLCMASGTQAAREASNMVD
LDSNPTKLLEIVQIGKQLLMTRGALTTFSVANDVAKYFAIIPAAFVSTYPQLGELNIMDLSSPTHAIMAAVIFNALIIPF
LIPLALKGIKFRADSAQHILRRNVWIYGLGGIIAPFIFIKLIDMLLVVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 3e-166 60
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 3e-166 60
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 6e-141 56
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 6e-141 56
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 6e-141 56
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 5e-141 56
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 6e-141 56
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 5e-143 56