Gene Information

Name : Lferr_2051 (Lferr_2051)
Accession : YP_002220473.1
Strain : Acidithiobacillus ferrooxidans ATCC 53993
Genome accession: NC_011206
Putative virulence/resistance : Resistance
Product : merR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 2055613 - 2056089 bp
Length : 477 bp
Strand : +
Note : TIGRFAM: Cd(II)/Pb(II)-responsive transcriptional regulator; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: vei:Veis_2831 putative transcriptional regulator, MerR family

DNA sequence : 
ATGCGAATCGGCGCACTTGGACAGGTGACCGGCGTGGATCCGGAGACCATCCGTTATTATGAGCGAATAGGCCTGTTGCC
CGCGCCAACCAGGCGGGCGAATGGTTATCGCGCTTATGGCCCCGCGCATCTGGAGCGACTTGCCTTTATTCGCCATTGCC
GGGCGCTGGATATGCCACTCGCGGATGTGCAGCGACTATTGCACTTGCTGGATCACCCACTGGACGATTGCCAAGACGTG
GATCGACTGATCGATACGCATCTGGCGCACGTACAGGGAAGACTCCAGTCCCTACAAGCGTTGGCGCGGCAGCTTGAGCA
ACTGCGCGGACGTTGCCATGGGCAACATGCAACCGCCGAATGCGGTATCCTGCATGAGTTGGTGGCCGCCGCCCAAGGGG
AAAACTGTATATGTCATGGCGGTTCGGTCCAGGCCCCCTTGAAGGATGTGCAGCGATCGGTAAGCCAAACAGGCTGA

Protein sequence : 
MRIGALGQVTGVDPETIRYYERIGLLPAPTRRANGYRAYGPAHLERLAFIRHCRALDMPLADVQRLLHLLDHPLDDCQDV
DRLIDTHLAHVQGRLQSLQALARQLEQLRGRCHGQHATAECGILHELVAAAQGENCICHGGSVQAPLKDVQRSVSQTG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cadR ACS32041.1 MerR family transcriptional regulator Not tested AbaR5 Protein 1e-23 49
ACICU_00234 YP_001844893.1 transcriptional regulator Not tested AbaR20 Protein 1e-23 49
cadR ADZ05769.1 MerR family transcriptional regulator Not tested AbaR11 Protein 1e-23 49
cadR ACN81029.1 MerR family transcriptional regulator Not tested AbaR5 Protein 1e-23 49
pbrR CAJ77021.1 transcription regulator Not tested AbaR1 Protein 1e-23 49
pbrR CAJ77094.1 Transcriptional regulator Not tested AbaR1 Protein 8e-24 49
cadR AGK36653.1 MerR family transcriptional regulator Not tested AbaR26 Protein 8e-24 49
ORF C98 AAN62191.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 5e-20 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Lferr_2051 YP_002220473.1 merR family transcriptional regulator BAC0058 Protein 2e-21 52
Lferr_2051 YP_002220473.1 merR family transcriptional regulator BAC0301 Protein 7e-21 48