Gene Information

Name : Lferr_0205 (Lferr_0205)
Accession : YP_002218671.1
Strain : Acidithiobacillus ferrooxidans ATCC 53993
Genome accession: NC_011206
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 194997 - 195698 bp
Length : 702 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gsu:GSU0678 ABC transporter, ATP-binding protein

DNA sequence : 
ATGTCTGAAACTTCTGAAACCGTGATTCGTGTCGCTAACGTGAGCAAGGTCTACGGCACCGGCGAGGCGGCCTCGACCGC
GTTGTCTGAAATCAGCCTCGACGTGGCGCGTGGTTCCTGGGTGGCCGTGATGGGCCCGTCGGGACACGGCAAGAGCACGC
TGCTCCAGATCATGGGCGGCCTCGACCGGCCTTCTCGTGGGCAGGTTTATCTGGACGGCATCGAGCTCAGCACCCTCGGT
TCCGCGCAACTTGCCCACACGCGGGCGCGGGCGATCGGGTTCGTGTTCCAGTCCTTCAATCTTCTGCCGCATCTGACGGC
ACTGGAGAACATCCAGCTCGCACTGTGGTTCGGCGGCAAGGAGAGCAAAGAAGGCCACGCGCGGGCGATGGCCCTGCTTG
ATTCGGTGGGATTGGCAGACAAGGCGCATCTTACCCCCGGCGCGCTCTCTGGTGGCCAGCAGCAGCGTGTGGCGGTGGCG
CGCGCGCTCGCCAATGATCCAGACATCCTATTGATGGACGAGCCCACCGGCAACCTCGACTCGGCTTCCGAAACTGACCT
GCTCGCGCTGCTCGGGCGCCTGCACGCGCAGGGGCGAACCATCGTCATGGTCACCCACAACCCCGCCGTGGCGGAGTGTG
CGCAGCGTATCGTGCGCGTGAAGGACGGGCGCGTCGAGGAGGATCACCATAATGGCAATTAG

Protein sequence : 
MSETSETVIRVANVSKVYGTGEAASTALSEISLDVARGSWVAVMGPSGHGKSTLLQIMGGLDRPSRGQVYLDGIELSTLG
SAQLAHTRARAIGFVFQSFNLLPHLTALENIQLALWFGGKESKEGHARAMALLDSVGLADKAHLTPGALSGGQQQRVAVA
RALANDPDILLMDEPTGNLDSASETDLLALLGRLHAQGRTIVMVTHNPAVAECAQRIVRVKDGRVEEDHHNGN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 1e-19 42
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-25 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Lferr_0205 YP_002218671.1 ABC transporter-like protein NC_012469.1.7686878. Protein 1e-43 46
Lferr_0205 YP_002218671.1 ABC transporter-like protein NC_008702.1.4606598. Protein 2e-33 45
Lferr_0205 YP_002218671.1 ABC transporter-like protein CP001581.1.gene598.p Protein 7e-34 44
Lferr_0205 YP_002218671.1 ABC transporter-like protein CP001581.1.gene798.p Protein 9e-35 44