Gene Information

Name : Lferr_1836 (Lferr_1836)
Accession : YP_002220264.1
Strain : Acidithiobacillus ferrooxidans ATCC 53993
Genome accession: NC_011206
Putative virulence/resistance : Virulence
Product : 4Fe-4S ferredoxin
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0437
EC number : -
Position : 1818599 - 1819222 bp
Length : 624 bp
Strand : +
Note : PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: pvi:Cvib_1686 4Fe-4S ferredoxin, iron-sulfur binding domain protein

DNA sequence : 
ATGACCAAATATGCCATGCTCATCAATCTGGATACCTGCGTCGGCTGCAATGCCTGTATGGCCGCTTGCGCCATGGAAAA
CCAGACGCCCGTGTGGAATCCGGAAAAATACCGCACCTATGTGTACGACGAAGAAATTGAAATCGGGGATAAGTTCCTCC
GCCAGTTTTTTCCCAAGCTCTGTAACCATTGCGACAACCCGCCCTGTGTGAGCGTCTGCCCGACTGGCGCCACCTGGAAG
GAGGCCAACGGCATCGTCCGCGTCAACCCCGACATCTGCATGGGTTGCCAAGCCTGTGCCATGGCCTGCCCCTACGATGC
TCGCTACCCTGCCGACAGCAACGATATCGACAAGGGACTGGGCTATTACGGCAAGGACTTTCTCAAACGTACCGTGCCCA
GCATCGATAAATGCGACTTCTGCTACGACCGCCTGCAGCAAGGCCTGGAGCCCGCCTGCGTGGAAACCTGCGTAGCCCAC
GCCCGCATTTTCGGTGACCTGGACAACCCCAACGATCTCATCACCAAGGTGGTCGCGACCGGCAAGGCTCAGGGTCTGCT
CACCGAACTGGGCACCGGCCCCAATATTTACTACATCCACAAGCTTCCGGAGGATCTCGTATGA

Protein sequence : 
MTKYAMLINLDTCVGCNACMAACAMENQTPVWNPEKYRTYVYDEEIEIGDKFLRQFFPKLCNHCDNPPCVSVCPTGATWK
EANGIVRVNPDICMGCQACAMACPYDARYPADSNDIDKGLGYYGKDFLKRTVPSIDKCDFCYDRLQQGLEPACVETCVAH
ARIFGDLDNPNDLITKVVATGKAQGLLTELGTGPNIYYIHKLPEDLV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrB YP_216393.1 tetrathionate reductase complex subunit B Virulence SPI-2 Protein 2e-31 42
ttrB NP_805056.2 tetrathionate reductase subunit B Virulence SPI-2 Protein 2e-31 42
ttrB CAB37414.1 tetrathionate reductase subunit B (TtrB) Virulence SPI-2 Protein 2e-31 42
ttrB NP_456142.1 tetrathionate reductase subunit B Virulence SPI-2 Protein 3e-31 42
ttrB NP_460350.1 tetrathionate reductase complex subunit B Virulence SPI-2 Protein 3e-31 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Lferr_1836 YP_002220264.1 4Fe-4S ferredoxin VFG0486 Protein 9e-32 42