Gene Information

Name : Lferr_1731 (Lferr_1731)
Accession : YP_002220160.1
Strain : Acidithiobacillus ferrooxidans ATCC 53993
Genome accession: NC_011206
Putative virulence/resistance : Unknown
Product : aspartate-semialdehyde dehydrogenase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0136
EC number : -
Position : 1704854 - 1705876 bp
Length : 1023 bp
Strand : -
Note : TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region; KEGG: mca:MCA2062 aspartate-semialdehyde dehydrogenase

DNA sequence :
ATGCAAAAATCACGATACAACGTAGTCATCCTGGGCGCTACCGGTGCCGTCGGCGAGGTCATGCTGCAGATTCTCGAGCA
GCGGAAGTTTCCAGTGGATAAGCTCTATCTGTTGGCCAGCAACCACTCGGCGGGCGGACGTCTGCCCTTCAACGGCCAGC
AGGTGCTGGTACAGGATGCGGCGACGTTCGATTGGTCGCAGGCCGATATCGGTCTGTTTTCCGCCGGAGCCAAGGTCAGC
GCGGAGTACGCGCCGAAGGCGGTGGCTGCCGGGTGTGTGGTCATCGACAACACCTCTCAGTTCCGCTATGACGATGAAAT
CCCGCTGGTGGTGCCCGAAGTGAACCCGCAACGGATTGCCGATTACCGGCGTCACGGTATCATCGCCAACCCCAATTGCT
CGACTATCCAGATGCTGCTGGCGCTGAAGCCCATTGCCGATGCGGCGGGCATCGAGCGGGTGGTGGTCGCGACGTATCAG
GCGGTCAGCGGTGCGGGTCGGCGGGCCATCGAAGAACTGGGCCAGCAAACCCTGGCGATCTTTCGTCACGAGGAGGGAGT
TGCCGAGGTGTTTCCCAAGCGGATTGCCTTCAACTGCCTGCCCCAGATCGATGTCTTCCAGGACAATGGCTATACCAAGG
AAGAGATGAAAATGCTCTGGGAGACCCGCAAAATCCTGGAGATGCCGGACATTGCCCTGACCGCTACCTGTGTGCGGGTG
CCGGTATTTTACGGCCATTCTGAAGCGGTCAACGTGGTAACCCGCGAGCCCATCACGCCGGAGGCCGTCCGCGCGCTGCT
GGAAAAGGCCCCGGGCATCGTCGTCGTGGATGATCGTGGCGCGGGTGCATGGCCCTCAGCACTGGATGCAGCCGGCCAGG
ACGCCACCTATGTAGGCCGCATTCGCGGCGACTGCTCCCATGTACGGGGCATCAATTTCTGGGTGGTTGCGGACAATATC
CGCAAGGGCGCGGCACTGAACAGCATCCAGATTGCAGAGTTGCTGATTCGCGACTATCTATAA

Protein sequence :
MQKSRYNVVILGATGAVGEVMLQILEQRKFPVDKLYLLASNHSAGGRLPFNGQQVLVQDAATFDWSQADIGLFSAGAKVS
AEYAPKAVAAGCVVIDNTSQFRYDDEIPLVVPEVNPQRIADYRRHGIIANPNCSTIQMLLALKPIADAAGIERVVVATYQ
AVSGAGRRAIEELGQQTLAIFRHEEGVAEVFPKRIAFNCLPQIDVFQDNGYTKEEMKMLWETRKILEMPDIALTATCVRV
PVFYGHSEAVNVVTREPITPEAVRALLEKAPGIVVVDDRGAGAWPSALDAAGQDATYVGRIRGDCSHVRGINFWVVADNI
RKGAALNSIQIAELLIRDYL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDB402_0195 YP_005126708.1 aspartate-semialdehyde dehydrogenase Not tested Not named Protein 7e-54 45