Gene Information

Name : Lferr_1696 (Lferr_1696)
Accession : YP_002220125.1
Strain : Acidithiobacillus ferrooxidans ATCC 53993
Genome accession: NC_011206
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1662300 - 1662962 bp
Length : 663 bp
Strand : -
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cte:CT0194 DNA-binding response regulator

DNA sequence : 
ATGCGTATTCTTCTGGTTGAAGACGACCGAATGATCGGTGAAGCCATTTCAGTTGCGCTGCGGGACGCGGCTTATGCAGT
GGACTGGGTGCGTGATGGTGAAACCGCTTTGCGGGCGATTGCCAATCAGGAACATCAGGCCATTTTTCTGGATTTGGGTT
TGCCCAAACTGGATGGTTGTACGTTGCTGCAACGTGTGCGCGCAGGGGGTAACTCCCTGCCAATCATCATTATTTCCGCC
CGCGACGCATTGGCGGATCGGGTGGAGGGGCTGGATTTGGGGGCTGATGATTATCTCGTCAAACCTTTTGCCATGGGCGA
GCTGCTGGCTCGTTTGCGCGCCATCATCCGCCGTCAGGGTGGGCAGGGCTCGCCGGTATTAGGTAATGGATCTCTGCAAC
TCGATCTAAGCACACATACGGCGCAGATCGGAGAGCTCAGCGTCCTGTTGACCAATAAGGAGTTTGCTTTATTGCAGGCA
CTGTTGCTACGTCCAGGTTCCATACTCAGTCGTGCGCAACTCGAAGAGCGCCTGTATGGCTGGGACGAAGGTGTAGAGAG
TAATAGCATCGATTTTCTGATTCACGGTCTGCGTAAGAAGCTCGGTGCCAAAGTCATCAGGAATGTGCGTGGCGCGGGTT
GGATGATCCCGCGTCAACCATGA

Protein sequence : 
MRILLVEDDRMIGEAISVALRDAAYAVDWVRDGETALRAIANQEHQAIFLDLGLPKLDGCTLLQRVRAGGNSLPIIIISA
RDALADRVEGLDLGADDYLVKPFAMGELLARLRAIIRRQGGQGSPVLGNGSLQLDLSTHTAQIGELSVLLTNKEFALLQA
LLLRPGSILSRAQLEERLYGWDEGVESNSIDFLIHGLRKKLGAKVIRNVRGAGWMIPRQP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 7e-26 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Lferr_1696 YP_002220125.1 winged helix family two component transcriptional regulator BAC0197 Protein 2e-28 44
Lferr_1696 YP_002220125.1 winged helix family two component transcriptional regulator BAC0487 Protein 7e-29 42
Lferr_1696 YP_002220125.1 winged helix family two component transcriptional regulator BAC0288 Protein 2e-19 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Lferr_1696 YP_002220125.1 winged helix family two component transcriptional regulator VFG0473 Protein 5e-32 44