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Name : Lferr_1634 (Lferr_1634) Accession : YP_002220063.1 Strain : Acidithiobacillus ferrooxidans ATCC 53993 Genome accession: NC_011206 Putative virulence/resistance : Virulence Product : NAD-dependent epimerase/dehydratase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0451 EC number : - Position : 1599853 - 1600878 bp Length : 1026 bp Strand : - Note : PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: sat:SYN_01112 UDP-N DNA sequence : ATGGCTCACGGAACGGACGACCTGATGGAAGGCAGAATACTTATTACCGGTGCTGCGGGTTTTATCGGGTTTCATCTGGC GCGTCGTCTGTTGGCCGATGGCTGGGTTGTCAGCGGGATAGACAACCTCAATGACTACTACGATCCCGGCCTGAAACGCG GCCGTCTGGCGCAACTGGAGGGGCACCCAGCCTTCCAGTTCCAACCTCTGGATCTGGCAGATCGCGAGGGTATGCAGACG CTTTTTGCAGGCCCCCACTTTGATGCCGTCGTCAACCTCGCGGCTCAGGCAGGGGTGCGGCACTCCCTGAAAGCACCGCA CAGCTACGTGGACAGTAATGTCGTTGGTTTTCTGAATGTGCTGGAGGGCTGCCGGGCGCAGGGGGTCGATCATCTGCTTT TCGCTTCTTCCAGTTCGGTATATGGTGCCAACAATCGTTTGCCTTACAGTGTCCATGACCCGGTAGATCATCCAGTCAGC CTTTATGCGGCCACCAAGCGGGCAGGTGAGCTCATGGCGCACAGCTACGCTCATCTTTATGGTATTCCCAGTACTGGATT GCGGTTTTTTACAGTCTATGGCCCTTGGGGGCGTCCCGATATGGCCTATTTCAGCTTTACGCAGAAAATCCTGGCCGGGC ATCCCATCCCCGTATTCAACCACGGCCAGATGCAGCGCGATTACACTTATATCGATGACATCATCGAAGGGGTGGCGCGA CTCATTCCACGTGCGCCAGAAGCGCAGGATATCTGGCCGGAAGACCCTGCAAGCAGTGCCGCCCCCTTCTGCATTCAGAA TATCGGTAACCACACACCCGTTGCACTCACGGATTTTATCCGCATTCTGGAGGAGTGCCTCGGCAAGTCCGCGCAAATTG AATGGCTTCCCATGCAGGATGGCGACGTGGTGGCTACCTATGCCGACGTTACCGCGTTACAGCAGAGCGTGGGCTTTGCC CCAAACACCCCTTTACGGACGGGTCTCCAGCGCTTTGTGACCTGGTATCGCCAGTACTACGGCTGA Protein sequence : MAHGTDDLMEGRILITGAAGFIGFHLARRLLADGWVVSGIDNLNDYYDPGLKRGRLAQLEGHPAFQFQPLDLADREGMQT LFAGPHFDAVVNLAAQAGVRHSLKAPHSYVDSNVVGFLNVLEGCRAQGVDHLLFASSSSVYGANNRLPYSVHDPVDHPVS LYAATKRAGELMAHSYAHLYGIPSTGLRFFTVYGPWGRPDMAYFSFTQKILAGHPIPVFNHGQMQRDYTYIDDIIEGVAR LIPRAPEAQDIWPEDPASSAAPFCIQNIGNHTPVALTDFIRILEECLGKSAQIEWLPMQDGDVVATYADVTALQQSVGFA PNTPLRTGLQRFVTWYRQYYG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1I | AAA64648.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 3e-87 | 50 |
