Gene Information

Name : Lferr_0164 (Lferr_0164)
Accession : YP_002218632.1
Strain : Acidithiobacillus ferrooxidans ATCC 53993
Genome accession: NC_011206
Putative virulence/resistance : Resistance
Product : merR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 152744 - 153151 bp
Length : 408 bp
Strand : +
Note : TIGRFAM: Hg(II)-responsive transcriptional regulator; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: ajs:Ajs_1301 putative transcriptional regulator, MerR family

DNA sequence :
ATGAAGCTTCTGACCATAGGTGCCCTGGCCGCATCTGCCGGTGTGCACGTCGAAACCGTCCGCTTCTATCAGCGGAAGGG
TCTACTCCCGGAACCGGACCGGCTGCCTGGCAGTATCCGGCGCTATGGGCAATCCGATCTGGAGCGACTGCACTTCGTGA
AATCGGCGAAAGGACTGGGCTTCAGCCTGGAAGAAATCGGACAGTTACTGAAGCTGGCTGATGGCACGCATTGCCGTGAG
GCGGCAGAATTAGCTTCCAGGCATTTGGCTAGTGTGCAGGCCCGCCTGAGGGAACTACATCGGATAGAGCATGCCCTACA
GAAGCAATTGGAAGCATGTAACTCTCAGCAGGGAAATTTCTCCTGTCCGCTCATTGATTCGTTACGGGAATTGATAACGG
TTTCGTGA

Protein sequence :
MKLLTIGALAASAGVHVETVRFYQRKGLLPEPDRLPGSIRRYGQSDLERLHFVKSAKGLGFSLEEIGQLLKLADGTHCRE
AAELASRHLASVQARLRELHRIEHALQKQLEACNSQQGNFSCPLIDSLRELITVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
merR AAN62181.1 organomercurial resistance regulatory protein MerR Not tested PAGI-2(C) Protein 5e-35 63
unnamed ABR13397.1 mercuric resistance operon regulatory protein Not tested PAGI-5 Protein 6e-34 59
merR CAJ77064.1 Mercury resistance operon regulatory protein Not tested AbaR1 Protein 4e-34 59
merR ACN81009.1 MerR activator/repressor of mer operon Not tested AbaR5 Protein 5e-34 59
merR AGK07025.1 MerR Not tested SGI1 Protein 4e-32 58
merR AGK07083.1 MerR Not tested SGI1 Protein 4e-32 58
merR ACK44535.1 MerR Not tested SGI1 Protein 1e-32 58
merR AET25401.1 MerR Not tested PAGI-2(C) Protein 1e-32 58
merR AFG30124.1 MerR Not tested PAGI-2 Protein 1e-32 58
merR YP_006098391.1 mercuric resistance operon transcriptional regulator Not tested Tn2411 Protein 1e-32 58
EXB37 ABD94723.1 putative regulator of mercury resistance conferring proteins Not tested ExoU island B Protein 4e-23 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Lferr_0164 YP_002218632.1 merR family transcriptional regulator BAC0684 Protein 2e-34 61
Lferr_0164 YP_002218632.1 merR family transcriptional regulator BAC0683 Protein 2e-34 61
Lferr_0164 YP_002218632.1 merR family transcriptional regulator BAC0686 Protein 1e-34 60
Lferr_0164 YP_002218632.1 merR family transcriptional regulator BAC0687 Protein 5e-33 58
Lferr_0164 YP_002218632.1 merR family transcriptional regulator BAC0232 Protein 5e-33 58
Lferr_0164 YP_002218632.1 merR family transcriptional regulator BAC0688 Protein 6e-34 58
Lferr_0164 YP_002218632.1 merR family transcriptional regulator BAC0689 Protein 1e-32 57