|
Name : Lferr_1516 (Lferr_1516) Accession : YP_002219950.1 Strain : Acidithiobacillus ferrooxidans ATCC 53993 Genome accession: NC_011206 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : - COG ID : - EC number : - Position : 1475730 - 1477214 bp Length : 1485 bp Strand : - Note : PFAM: Integrase catalytic region; KEGG: eba:p2A256 transposase DNA sequence : ATGCCCGGCAAGTGGTTGGGAGATATTCAGGTGAACAAATACAAGGAACTTCGCAGGCAGTATCAGCAAGAGACCGCTGC CAACAAGATGGGAATTAGTGTGCGCACGGCGCGACGATTAGAAAGGCGGGAGGCTGCTCTGCCCTCCCAGAGGGGGCCAC GGACCTGGCGCACGCGCAAGGATCCCTTTGCGGCCTACTGGCAAAGTGAGATTTTGCCGCTTTTGCGGCAAGCCCCCGGT TTGTTGGCTACGACCTTGCTGGAGGAGATGCAGCGGTTACATCCGGGAGAGGTAGAGCCTGGCCATCTCCGGACCTTGCA ACGCCGCATTCGGGACTGGCGGGCATTGGAGGGGCCGGATCGAGAGATTTACTTCCCGCAGGCCCACGATCCAGGAAGGC AATGCCTTTCGGATTACACCGACGCCACGGAGTTATGCGTCACTATCGATGGGCAGATTCTGGTCCATAAACTCTACCAG TTCGTGATGGCCTACTCGGGGTGGCGCCACGTCGAGGTAGTTCTGGGTGGCGAGAGCTTCATATCCCTTTCTGCAGGTCT ACAGAATGCCCTCTGGCGCCTGGGCGGCGTTCCGCAAGAGCACCGCACGGACCACCTCACGGCGGCCTATAACAATCAAT CCGAGCACGAAGAGTTGACCCGGCGGTATGCCGCCCTGTGTCGGGATTACGATTTGCGGGCCACCACCAATAATCAGGGG GAGTCCCAGGAAAATGGATCGGTTGAGGCCCGTCAACGGACTTTGAAGCAGGCCCTGAATCAGGCGCTGATGCTGCGGGG TTATCGCGACTTCAGCGATTTGGCCGCATATCAGGCCTTTGTCGAGGAAGTCGCCACCCACATGAATCGGCGGGTGCAAA AGCGTTTGGCCGAGGAACGCCCGCTGCTCCAGCCTCTTCCCGAGCGACGGAGCAGCGATTACGTCGAGACGACGGTTCGG GTCAGCAGCAATGGGGTGTTCCGAGTATCCCACACCACGTACAGCGCACCGTCCCGTCTGCGTGGCCATCCTTTGCAGGT ACGCATCTACACCCAGCATATCGAAGCATACTATGGCAGCACTCTGGTGGTGCGTGCGGAGAAAGGCCTGCGGGACGAGG CGGTGATCGATTATCGCCATGTACTGCCCATCCTCCGGCGCAAGCCCGGGGCCCTGATGCGTTGGGTATACCGGGATGCC CTGTTCCCTCGCCAGGCTTACCGGGATACCTGGGAGCGCTTACAGGAGCGCTGCCCAGAGCGGGACGCCTGCCGGATCAT GGTGGGTCTGTTGGAGTTGGCGGCTGATGCCTGTGAGGCGGAGTTGGCATTGCGTTTGGACCAGATCCTGGCGGCGGGAG AACTCCCCGGTCTGGAGACCCTCCGAATGGCCCTGCATCCCGCACAAACGGTACCGACAGACCCCATCATATCGGTTCCG TCCCTGGAGCAATATGATCAGCTCCTGATGGAGGTGACCGCATGA Protein sequence : MPGKWLGDIQVNKYKELRRQYQQETAANKMGISVRTARRLERREAALPSQRGPRTWRTRKDPFAAYWQSEILPLLRQAPG LLATTLLEEMQRLHPGEVEPGHLRTLQRRIRDWRALEGPDREIYFPQAHDPGRQCLSDYTDATELCVTIDGQILVHKLYQ FVMAYSGWRHVEVVLGGESFISLSAGLQNALWRLGGVPQEHRTDHLTAAYNNQSEHEELTRRYAALCRDYDLRATTNNQG ESQENGSVEARQRTLKQALNQALMLRGYRDFSDLAAYQAFVEEVATHMNRRVQKRLAEERPLLQPLPERRSSDYVETTVR VSSNGVFRVSHTTYSAPSRLRGHPLQVRIYTQHIEAYYGSTLVVRAEKGLRDEAVIDYRHVLPILRRKPGALMRWVYRDA LFPRQAYRDTWERLQERCPERDACRIMVGLLELAADACEAELALRLDQILAAGELPGLETLRMALHPAQTVPTDPIISVP SLEQYDQLLMEVTA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| c3607 | NP_755482.1 | hypothetical protein | Not tested | PAI I CFT073 | Protein | 4e-74 | 43 |
| c5144 | NP_756992.1 | hypothetical protein | Not tested | PAI II CFT073 | Protein | 4e-74 | 43 |
| r6 | AAC61728.1 | transposase R6 | Not tested | PAI I CFT073 | Protein | 7e-74 | 43 |
| unnamed | AAL67386.1 | R6-like protein | Not tested | PAI II CFT073 | Protein | 7e-74 | 43 |
| unnamed | AAL67341.1 | R6-like protein | Not tested | PAI II CFT073 | Protein | 3e-73 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Lferr_1516 | YP_002219950.1 | integrase catalytic subunit | VFG1728 | Protein | 2e-74 | 43 |
