Gene Information

Name : glcE (Lferr_1361)
Accession : YP_002219801.1
Strain : Acidithiobacillus ferrooxidans ATCC 53993
Genome accession: NC_011206
Putative virulence/resistance : Unknown
Product : glycolate oxidase FAD-binding subunit
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0277
EC number : -
Position : 1318340 - 1319452 bp
Length : 1113 bp
Strand : -
Note : PFAM: FAD linked oxidase domain protein; KEGG: noc:Noc_0844 glycolate oxidase FAD binding subunit

DNA sequence :
ATGTGCATCATGGCCAGTTGCCTTTCCCCGAACTGGAGCGTTTTTGACATAGATCAGAGCCAGACCTTGCAGGTGGCCGT
ACAAGAGGCCCACGCCAGATCCCAACCGCTCGCTATTCGTGGTGGCGGGAGCAAGACGTTTTATGGCCGCCAAACGCCGG
CATGCGATCTGCTCGATCTCGGTGGCCACCGGGGCATCATCGACTACGCGCCCAACGAGCTTTTCATCACTCTGCGCGCG
GGTACTTCCTTGCAAGCACTGGAGGCACAACTGGCGGAAGCCGGGCAGATGCTCCCGTTCGAGCCCCCGCATTTCGGACC
CGCCGCGACCATTGGCGGGACGCTGGCCTGTGGGTTTTCCGGTCCGCGCCGTCCCTACGCAGGGTCGGCTCGCGATATGG
TGCTGGGCATGCGCATCCTCAATGGACAAGGCGAAATCCTGCGCTTCGGCGGGCAGGTCATGAAAAATGTCGCCGGTTAT
GATGTCTCCCGTTTGATGGTAGGTGCCCTCGGCACCCTGGGCGTTCTGCTCGAGGTGAGCCTCAAGGTGCTGCCGCGTCC
CGATAGTACCGTGACTCTGGTATGGCCGATGGACCCCGTTACCGCCGTCCAACGCATGAATGACTGGGCTGGACAGCCAC
TGCCGCTCTCCTCTACGGCGTATGATGGTGAGCACCTGTATATACGTCTTTCCGGCACCGGAAGCGCCGTGCGGGCGGCA
CAGACCCGGCTGGGCGGCGAAAGGTTGCCCGATGCCGAGGCGGCGGCCTTCTGGGTGGCACTGCGCGAACAGCGGAACGA
TTTTTTTCAGGGGGACGCACCCTTATGGCGTCTGGCCGTGGCCCCGGCCACCCCCCCCTTGCCGCTCGGGGATCAGACCC
TTATCGAATGGGGCGGCGGTCAACGCTGGCTGCGTGGTGCCCTTGATGCGACTGCCTTGCGGCAGTTGGCAGCGGAGCAC
GGTGGTCACGCCACCCTGTTTCGTGGTGGAAATCGCCGTGGCGAGGTCTTTCATCCCCTCGCACCACCGCTGCTGGCGAT
ACAACAACGGCTCAAAGCGGCCTTCGATCCGCGCGGCATCCTCAATTCGGGCCGTCTTTACGCCACCCTCTGA

Protein sequence :
MCIMASCLSPNWSVFDIDQSQTLQVAVQEAHARSQPLAIRGGGSKTFYGRQTPACDLLDLGGHRGIIDYAPNELFITLRA
GTSLQALEAQLAEAGQMLPFEPPHFGPAATIGGTLACGFSGPRRPYAGSARDMVLGMRILNGQGEILRFGGQVMKNVAGY
DVSRLMVGALGTLGVLLEVSLKVLPRPDSTVTLVWPMDPVTAVQRMNDWAGQPLPLSSTAYDGEHLYIRLSGTGSAVRAA
QTRLGGERLPDAEAAAFWVALREQRNDFFQGDAPLWRLAVAPATPPLPLGDQTLIEWGGGQRWLRGALDATALRQLAAEH
GGHATLFRGGNRRGEVFHPLAPPLLAIQQRLKAAFDPRGILNSGRLYATL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcE CAE85244.1 GlcE protein Not tested PAI V 536 Protein 2e-69 49