Gene Information

Name : Lferr_1280 (Lferr_1280)
Accession : YP_002219725.1
Strain : Acidithiobacillus ferrooxidans ATCC 53993
Genome accession: NC_011206
Putative virulence/resistance : Unknown
Product : ssDNA-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 1241108 - 1241602 bp
Length : 495 bp
Strand : +
Note : TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: net:Neut_2461 single-strand binding protein

DNA sequence :
ATGGCAGGCGTGAATAAAGTGATCTTGTTGGGCCATCTGGGGCGAGATCCTGAGATGCGGTATATGCCCGATGGGACGGC
GGTCGCCAATATGACCATCGCCACGTCGGAGTCCTACAAGGATCGGGACGGCAATCGCCAGGAGCGTACCGAGTGGCACC
GCGTTGCACTCTTCGCGAGGACGGCGGAAGTCGCCGGCGAATACTTGCGTAAGGGAAGCCGGGCGTACATCGAGGGGCGT
ATCCGCACCAGAAAATGGACCGATAAGGACGGTCAGGAGCGGTATTCCACGGAGATCGTGGGCGACCGGCTTCAGTTGAT
CGGTGGGCGCCGCGACGGGGCCGACGGCGGCAATCCAGCGCCACAGCATGGTGGTGGGGGTGGCGGCGACATGGGTGCAG
CGCCGATGGAGGAATTTGACGACGATATTCCCTTTATCACCAAGGCGGAAACCATCTGTCAACCACGCTGGCGGCTTCCG
CGAGTGCGGTTCTGA

Protein sequence :
MAGVNKVILLGHLGRDPEMRYMPDGTAVANMTIATSESYKDRDGNRQERTEWHRVALFARTAEVAGEYLRKGSRAYIEGR
IRTRKWTDKDGQERYSTEIVGDRLQLIGGRRDGADGGNPAPQHGGGGGGDMGAAPMEEFDDDIPFITKAETICQPRWRLP
RVRF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb1 YP_005176252.1 single-stranded DNA-binding protein Not tested ICEPmu1 Protein 2e-31 52