Gene Information

Name : Lferr_1181 (Lferr_1181)
Accession : YP_002219626.1
Strain : Acidithiobacillus ferrooxidans ATCC 53993
Genome accession: NC_011206
Putative virulence/resistance : Unknown
Product : TraR/DksA family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG1734
EC number : -
Position : 1154433 - 1154897 bp
Length : 465 bp
Strand : -
Note : TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger DksA/TraR C4-type; KEGG: mca:MCA0517 DnaK suppressor protein

DNA sequence :
ATGGACCAAAGCATGCTCCAGCCAACGCCAGCAGCGCCCGGCGGCGCCCAGCAGTTCACCGCGTTCACTCCCTACGAGCC
CGTTCCCGGCGAAGAGTACATGAGCCCGGCGCAGATCGCCCATTTCCGGAAGATTCTGGAAGACTGGCGCGGTGAACTGA
TGGCGGAAGTCGACCGTACCGTGCAGCACATGCAGATGGAAAACGTCAACTATTCCGACCCCAACGACCGGGCCAGCCTG
GAGACGGATATGGGTCTGGAGTTGCGCGCCCGCGACAGGGAGCGCAAGCTGATCCGCAAGATCTCCCAGGCCCTCGACCG
CATCAAGACCGGCGAATATGGCTATTGCGAAAGCTGTGGTGTGGAGATTGGTCTGCGCCGCCTCGAAGCCCGCCCTACCG
CCACCCTGTGCATCGATTGCAAAACGCTGGAAGAAAAACGCGAGAAGCAGATGGCGCAAGATTGA

Protein sequence :
MDQSMLQPTPAAPGGAQQFTAFTPYEPVPGEEYMSPAQIAHFRKILEDWRGELMAEVDRTVQHMQMENVNYSDPNDRASL
ETDMGLELRARDRERKLIRKISQALDRIKTGEYGYCESCGVEIGLRRLEARPTATLCIDCKTLEEKREKQMAQD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00314 YP_008207779.1 DnaK suppressor protein Not tested AbaR25 Protein 1e-43 58
BJAB0868_00318 YP_008211644.1 DnaK suppressor protein Not tested AbaR26 Protein 1e-43 58