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Name : SeD_A4939 (SeD_A4939) Accession : YP_002218401.1 Strain : Salmonella enterica CT_02021853 Genome accession: NC_011205 Putative virulence/resistance : Unknown Product : DNA helicase II Function : - COG functional category : R : General function prediction only COG ID : COG3972 EC number : - Position : 4772922 - 4774763 bp Length : 1842 bp Strand : - Note : - DNA sequence : ATGGCAATCATTATTCCCACCGTAAGTAGCTGTAGCGAGAAAATTACAGCAGGCGAAAAAAGGCTGGCAAGGCTACTGGA GAGAGGGTTAAGCGATAGCTGTACCTGCTGGTACGACACGCCGATGGGCAAACAACATAGTCATCCTGACTTTGTTATTC TGACCCCCGACAAAGGTATATTATTCATTGAAGTTAAGGACTGGTTTATTACAAAAATCAAAGGTGCTAATAAAACATAT GTCCAGTATGAAACTAAAAATGGTATAGAAAGTTTAAAAAATCCTATTGAGCAAGTTCGTCAGTATGCTTTCCAGACCAT TAATAGCCTCAAAACAGATCCACAACTTCGCCAGCAAGAAGGCCAATATCAGGGCAGTTTTGTTATGCCGTATGGATACG GCGTGTATCTGTCCAATATTTCTCGCTCTCAGCTTGAGAAAGCCTTTTCACCTACCGAACTTGCAGACATACTCCCTACC GATAAGGTGATATGTAAGGATGAACTCAATGAATTTATGTCTCAGGAAAAAGTAGCTGCCAGGCTCGCATTACTTGCCAA ATACAACTTTGCTCACCAGACTACACCTCAGCAGCTGGATCGTATAAGATGGCATCTTTATCCTGATATTCGAATCCATA AACCCATTAAGCAAGCTGATGTAAAGAATTTCACACTCCACACACCAAGTATTATATCCATTATGGACCGGCAACAGGAA CAACTTGCAAGAAGCATGGGGTCCGGACATCGGGTGATTCATGGCGTTGCAGGATCTGGTAAATCACTGATATTACTTCA CCGTTGCCTCGAACTTGCAAATAATATTGAAAACGAAAAACCTGTTTTGGTCATTTGCTACAACATTACGCTCGCCAGAA AACTCAAAGCCCTTATTGAGAAACATACGCTCAGGCTTCCTGTTGAGGTCACACATTTTCATTTATGGTGTCATCAACAA TTACAGTCTTATGGACGGCTACCGCCAAAAAGCAAAAACTTTGTTGAGCTAATGGAAAATGCCCTTTCTATCGCCTTTGA GGATGGAATCATCCAGCCAGAGCAGTACAGCGCCGTGCTGATCGACGAAGGCCACGATTTTAATCCTGAGTGGCTAAGAA TTCTTACCCGAATGGCAGACACCAAAAATAACACACTGCTTTTCCTTTATGATGATGCACAATCAATTTATCAGAAAAAG AAAGCGCTCGACTTCACCTTATCCAGCGTCGGCATTAAAGCTCAGGGGCGAACGACAATCCTGAATATTAATTACCGTAA TACTCAGCAAATATTACATTTCGCTAGTAGCATTGCATTTAACTATCTCAATAATCACATTGAGGATGCTCTTAAATATC AGCAGCCCGACTCAGGCGGAATTGCGGGTTCTTATCCTGAGTTGACCTGTTTTGATAACCAGGATGAGGAAATAACGCAT ATCCTTAACTGGGTTATCGAACAGCACCAGCGGGGCATTCCGTGGTTTGATATTGCCATATTGTGCCCATCAACCTATAG CATTAAAGACGTGCTGGGACCACAACTGACGGCTCGCAATATCCCTTATCAAATGATTATTACCTCTGCCGATAAAAAAA ACTGGTCGCCACAGCAAGAACGGCTGTGTGTTATGCCTCTGCCGAGCAGTAAAGGACTCGAATTTCAGTCAGTCGCTGTC ATGGACGCAGCCAGATCCAAAAATGAAGAAGACTTGAGCAATGATATCAAAAGGCTTTACGTTGGCTTCACACGGGCTCG CTATAATCTGCTGATAACTATGAATGGAGAAAATGCACTCAGCGAGCATCTTCTCACTACCTATAAGCAGATAACACGAT AG Protein sequence : MAIIIPTVSSCSEKITAGEKRLARLLERGLSDSCTCWYDTPMGKQHSHPDFVILTPDKGILFIEVKDWFITKIKGANKTY VQYETKNGIESLKNPIEQVRQYAFQTINSLKTDPQLRQQEGQYQGSFVMPYGYGVYLSNISRSQLEKAFSPTELADILPT DKVICKDELNEFMSQEKVAARLALLAKYNFAHQTTPQQLDRIRWHLYPDIRIHKPIKQADVKNFTLHTPSIISIMDRQQE QLARSMGSGHRVIHGVAGSGKSLILLHRCLELANNIENEKPVLVICYNITLARKLKALIEKHTLRLPVEVTHFHLWCHQQ LQSYGRLPPKSKNFVELMENALSIAFEDGIIQPEQYSAVLIDEGHDFNPEWLRILTRMADTKNNTLLFLYDDAQSIYQKK KALDFTLSSVGIKAQGRTTILNINYRNTQQILHFASSIAFNYLNNHIEDALKYQQPDSGGIAGSYPELTCFDNQDEEITH ILNWVIEQHQRGIPWFDIAILCPSTYSIKDVLGPQLTARNIPYQMIITSADKKNWSPQQERLCVMPLPSSKGLEFQSVAV MDAARSKNEEDLSNDIKRLYVGFTRARYNLLITMNGENALSEHLLTTYKQITR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| uvrD | ADD91733.1 | putative uvrD/REP helicase | Not tested | PAI-I AL862 | Protein | 1e-107 | 42 |
| S12 | AAQ19135.1 | putative UvrD/REP helicase | Not tested | PAI I CL3 | Protein | 2e-105 | 41 |
