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Name : SeD_A4659 (SeD_A4659) Accession : YP_002218158.1 Strain : Salmonella enterica CT_02021853 Genome accession: NC_011205 Putative virulence/resistance : Virulence Product : cyclic diguanylate phosphodiesterase (EAL) domain-containing protein Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG4943 EC number : - Position : 4517840 - 4519441 bp Length : 1602 bp Strand : + Note : identified by match to protein family HMM PF00563 DNA sequence : ATGAGTCAAAGCACACGACGCAAGGTGTTGAGATTTCTCGGAACGATCATTGTGGTGTTACTTCCTATATTGCTGGCGAT CTGGTTTGCTCATATCCGGGCAGTCTCTGAAACCAGAAATCAGTTACATTCATTTGCGCAGTTGGTATTAGATAAAACGG AGCGGGTTATCCTGCAAGCAGATTTAGCCCGCGATGCCGCTGAACAATATCAGGGGCAAGCCTGTACGCCAGCCCATCAA CAGCGAATGCTGAATATTATCCGCGGTCGTTTGTACATTAATGAGTTGATTTATGCTAAGGGCCAGCGTTTTCTATGCTC TACGGTTATGACGCCAACAAGTCCTTATTTTATTCCCCGCGCTGACTATAAACGAAAGCCTGACATCGCTATTTATTACT ATCGTGATACGCCTTTTTTCAACGGTTATAAAATGACATATATGCAGCGGGGAAACTATGTCGCGGTTATCAATCCCTTA TCTTATAGCGAGGTGATGTCAGACGATCCGGCGTTGGCCTGGGGAATGTATGATACGGTGACCAACACCTTTTTCTCCCT GAGTGAACAGGCGCAGGCTGATCAGCTATTACCTTTGGTACGACGGAGTGAACCTGTGTTCCAACAGGGTGAGCGTTTTT ATACTCTGGTTAAATCAGCAAAACGACCGGTTGCCACGATTGTTTCAACCTCAAAGCAACGCTTTTACCAGAACCTCTTT CATCAGCTTACGTTAACGCTACCGTTAGGGATCATCTGTAGCATTATCGTCTTATTTATGTGGTCACGATCCCGGCAGGC ATATTACTCACCGCGTCGATTGCTGCAACGGGCCATTACCAGGCACCAGCTTTGCCTTCATTATCAGCCGATCATTGATA TCCGAAACGGGACATGTGTAGGTGCCGAAGCGCTATTGCGTTGGCCGGGCTATCACGGTCCGGTGATGAGCCCGTGCGAA TTTATTCCGCTGGCGGAAAAAGAGGGGATGATTGAGCAGATCACCGATTATGTCGTCGAAGAGGTATTTAATGATTTAGG TGGTTTTCTGGCCGCGCACCCGCATCTTTATGTCTCTATCAATCTCTCTGCCGCTGATTTTCTCTCTTTCCGGCTAATTG TGATGATTCATGAAAAAACGCGTCAGCATTCAGTGCTTGCGCAACAGATAAAAGTTGAAGTGACCGAGCGCGGATTTATT GATGTGCCTAAAATGACGCCGATTATTCAGGCGTTTCGCCAGGCGGGATACGAGGTGGCAATTGATGACTTTGGTACCGG CTATTCGAACTTGCATAACCTGTACTCATTAAATGTCGACCTTTTAAAAATTGATAAATCTTTTGTCGACACGCTAACCA CTAATAGCGCCAGCCATTTGATTGTGGAACATATTATTGAAATGGCGCAAAGTTTGCGGCTAAAAATCATTGCTGAGGGG GTTGAAACGGCTGAACAGGTTAGCTGGTTGCTAAAACGCGGCGTTCAGTATTGTCAGGGATGGCACTTTGCGAAGGCGTT GCCACCGCAGGAATTCATCGCCTGGTTACAACAAACGCCCGCGCCTCTGACGATACGCGGGCAGAGGCCCTACAGGCGGT GA Protein sequence : MSQSTRRKVLRFLGTIIVVLLPILLAIWFAHIRAVSETRNQLHSFAQLVLDKTERVILQADLARDAAEQYQGQACTPAHQ QRMLNIIRGRLYINELIYAKGQRFLCSTVMTPTSPYFIPRADYKRKPDIAIYYYRDTPFFNGYKMTYMQRGNYVAVINPL SYSEVMSDDPALAWGMYDTVTNTFFSLSEQAQADQLLPLVRRSEPVFQQGERFYTLVKSAKRPVATIVSTSKQRFYQNLF HQLTLTLPLGIICSIIVLFMWSRSRQAYYSPRRLLQRAITRHQLCLHYQPIIDIRNGTCVGAEALLRWPGYHGPVMSPCE FIPLAEKEGMIEQITDYVVEEVFNDLGGFLAAHPHLYVSINLSAADFLSFRLIVMIHEKTRQHSVLAQQIKVEVTERGFI DVPKMTPIIQAFRQAGYEVAIDDFGTGYSNLHNLYSLNVDLLKIDKSFVDTLTTNSASHLIVEHIIEMAQSLRLKIIAEG VETAEQVSWLLKRGVQYCQGWHFAKALPPQEFIAWLQQTPAPLTIRGQRPYRR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| yjcC | YP_219130.1 | diguanylate cyclase/phosphodiesterase | Not tested | SPI-4 | Protein | 0.0 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SeD_A4659 | YP_002218158.1 | cyclic diguanylate phosphodiesterase (EAL) domain-containing protein | VFG0584 | Protein | 0.0 | 99 |
