Gene Information

Name : SeD_A4652 (SeD_A4652)
Accession : YP_002218152.1
Strain : Salmonella enterica CT_02021853
Genome accession: NC_011205
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4493316 - 4493948 bp
Length : 633 bp
Strand : +
Note : identified by glimmer

DNA sequence :
ATGGAAGACGAAAGTAATCCGTGGCCTAGTTTTGTTGATACATTCTCTACGGTATTGTGTATTTTTATATTTCTTATGTT
GGTGTTTGCACTTAATAATATGATTATTATGTATGACAACTCAATTAAAGTTTATAAAGCAAATATAGAGAATAAGACTA
AATCTACTGCTCAAAATAGCGGAGCCAATGACAATTCAAATGCTAATGAAATAGTTAATAAAGAAGTGAATACTCAAGAT
GTGTCGGACGGAATGACTACAATGTCAGGTAAGGAGGTTGGAGTATACGATATCGCCGATGGTCAGAAAATTGATATAAC
ATCTACAAAAAATGAGCTTGTTATTACGTATCATGGCAGGCTGAGAAGCTTTTCTGAAGAGGATACTCATAAAATAGAGG
CTTGGTTAGAAGACAAAATCAATAGTAATTTATTGATAGAAATGGTTATTCCTCAGGCAGACATCTCTTTCTCTGACTCT
TTACGACTGGGATATGAACGGGGAATTATTTTAATGAAAGAGATTAAGAAGATATATCCTGATGTAGTTATTGACATGAG
TGTTAACTCCGCAGCATCAAGTACAACGAGTAAAGCTATTATCACGACTATTAATAAAAAGGTGTCAGAGTGA

Protein sequence :
MEDESNPWPSFVDTFSTVLCIFIFLMLVFALNNMIIMYDNSIKVYKANIENKTKSTAQNSGANDNSNANEIVNKEVNTQD
VSDGMTTMSGKEVGVYDIADGQKIDITSTKNELVITYHGRLRSFSEEDTHKIEAWLEDKINSNLLIEMVIPQADISFSDS
LRLGYERGIILMKEIKKIYPDVVIDMSVNSAASSTTSKAIITTINKKVSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SC4136 YP_219123.1 hypothetical protein Not tested SPI-4 Protein 4e-84 100
STY4452 NP_458554.1 putative exported protein Not tested SPI-4 Protein 1e-83 99
STM4257 NP_463122.1 hypothetical protein Not tested SPI-4 Protein 9e-82 98
siiA CAE11793.1 putative inner membrane or exported protein Virulence SPI-4 Protein 6e-82 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SeD_A4652 YP_002218152.1 hypothetical protein VFG0577 Protein 3e-82 98