Gene Information

Name : SeD_A4154 (SeD_A4154)
Accession : YP_002217717.1
Strain : Salmonella enterica CT_02021853
Genome accession: NC_011205
Putative virulence/resistance : Virulence
Product : inner membrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3999560 - 4000087 bp
Length : 528 bp
Strand : -
Note : -

DNA sequence :
ATGGCGGGGCGCTATTTTCATGGTATCCCACATCAGAAGGGCAATATCATGAACAATCGTCGTGGTTTAACCGCCGTCCT
GGCGACGTTGATTACGTTTTCCCTGAGCGCTACGCCTGTGCTGGCGAATCCGGGAAATGGTAATGGCGGCGGACATAGTA
ATAACGCGGCTAATCAGGGTAATAACGGTAACGGGCATAAAGGAAATGCCGGGCAAAGAACGGAACACCGTAAAAATGGC
GGTAAACCGGATCACGTCGAGTCGGACATTAGCTACGCTGTCGCCAGGCAACTGGCAGTAAATTTAGGGCTGACGGGTTA
TCAGTCTTTACCACCGGGGATTGCGAAAAATCTGGCGAGAGGAAAACCGCTGCCGCCGGGAATCGCTAAAAAAACGGTGC
CGGCGTCTATGCTGGGACAATTACCTTATTATCCGGGCTATGAGTGGAAAATCGTTGGGGATAATCTGGTGCTGATCGCG
CTCAGTACCGCGGTGGTCACGGCGATTATTAATGGCGTATTTGATTAA

Protein sequence :
MAGRYFHGIPHQKGNIMNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHSNNAANQGNNGNGHKGNAGQRTEHRKNG
GKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPASMLGQLPYYPGYEWKIVGDNLVLIA
LSTAVVTAIINGVFD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cigR YP_218670.1 inner membrane protein Not tested SPI-3 Protein 2e-50 99
cigR NP_462661.1 inner membrane protein Virulence SPI-3 Protein 3e-51 99
cigR AAD16958.1 CigR Virulence SPI-3 Protein 2e-51 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SeD_A4154 YP_002217717.1 inner membrane protein VFG0573 Protein 8e-52 99