Name : SeD_A4022 (SeD_A4022) Accession : YP_002217599.1 Strain : Salmonella enterica CT_02021853 Genome accession: NC_011205 Putative virulence/resistance : Virulence Product : gram-negative pili assembly chaperone, N- domain Function : - COG functional category : N : Cell motility COG ID : COG3121 EC number : - Position : 3866594 - 3867292 bp Length : 699 bp Strand : - Note : identified by match to protein family HMM PF00345; match to protein family HMM PF02753 DNA sequence : ATGAACCGCTCACGTTTGATATCTTGCACAGCACTGGTGCTGGCGTTGATTGCTCAAAACAGTTTTGCCGGAGGCGTGGC ATTAAGCAGCACGCGTGTTATTTATGACGGTAGTAGAAAGGAAGCTTCTCTTACGGTAAATAATAAAAGCACCACGGATG AATTTCTCATTCAGTCATGGATTGATGATGCTAACGGTAATAAAAAGACGCCCTTTATCATCACTCCACCGTTATTTAAA TTAAGCCCGACTAAAAATAACGTTTTACGTATTGTTAATACGACGAACACGTTACCGCAGGATCGCGAGTCCGTTTATTG GATTAACGTAAAAGCTATTCCTGCCAAAAGTGAAGACGCGGAAGCTAAAAACGTACTGCAGATCGCCGTACGTACCCGCT TAAAACTGTTCTATCGCCCGGCGGGCCTGAAAGGCAATAGCATGGACGGCTGGAACAAACTGCAGTTCACCAGCGCAGGG GCTAACCAGATCAAAGTGGAAAACCCATCTGCCTTTAACCTGACGTTTAATAAATTTTATGCCAACGGCCGTGATATTGA AAAAACGGGAATGGTTCCGGCAAAAGGCTCATTGAATATTGAACTGCCAGCCGGCACCGGCAAGGTAAGCGAAGTTAAAT ACAACATTATTAATGACTTTGGCACGGCTGGCGACATGTTGACACAGCGCGTTAACTAA Protein sequence : MNRSRLISCTALVLALIAQNSFAGGVALSSTRVIYDGSRKEASLTVNNKSTTDEFLIQSWIDDANGNKKTPFIITPPLFK LSPTKNNVLRIVNTTNTLPQDRESVYWINVKAIPAKSEDAEAKNVLQIAVRTRLKLFYRPAGLKGNSMDGWNKLQFTSAG ANQIKVENPSAFNLTFNKFYANGRDIEKTGMVPAKGSLNIELPAGTGKVSEVKYNIINDFGTAGDMLTQRVN |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
fim2C | AFH78430.1 | putative fimbrial chaperone protein | Virulence | KpGI-5 | Protein | 2e-40 | 42 |
sfaE | CAC16952.2 | SfaE protein | Virulence | PAI III 536 | Protein | 3e-38 | 42 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
SeD_A4022 | YP_002217599.1 | gram-negative pili assembly chaperone, N- domain | VFG0455 | Protein | 4e-104 | 100 |
SeD_A4022 | YP_002217599.1 | gram-negative pili assembly chaperone, N- domain | VFG1644 | Protein | 2e-38 | 42 |
SeD_A4022 | YP_002217599.1 | gram-negative pili assembly chaperone, N- domain | VFG0911 | Protein | 2e-38 | 42 |
SeD_A4022 | YP_002217599.1 | gram-negative pili assembly chaperone, N- domain | VFG0445 | Protein | 1e-40 | 42 |