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Name : SeD_A3918 (SeD_A3918) Accession : YP_002217505.1 Strain : Salmonella enterica CT_02021853 Genome accession: NC_011205 Putative virulence/resistance : Virulence Product : ribokinase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0524 EC number : - Position : 3756123 - 3757337 bp Length : 1215 bp Strand : + Note : identified by match to protein family HMM PF00294; match to protein family HMM PF08220; match to protein family HMM PF08543 DNA sequence : ATGAAATTTGAACGCCATCATAGAATATTGAAGGAACTCAGTATTTCGGGAGTTGTAAAAGTTTCAAATCTGGCGAAAAG TCTCAAGGTAACAAAGGAAACTATTCGTTCAGATCTCAATGAACTTGCCGGACAGGGATATCTTACTCGCTGTCATGGTG GTGCATTTATTACCCTTGATTCTCTTGATAACGTCGCAAAAAATGAAATTGCTTATGTGCTGGAAAAATATGAATCAGCG CAGAAAATAAAAAAAGGTCTCTCTGCCATGAAAAATAATGTATGTGTTATTGGCTCGTTCAATGTTGATATTATCAGTTA TCTACCGAGATTACCCTCAACGGGAGAATCATTGCTGGCCGATAAATTTATTTTTTCACCCGGCGGTAAGGGATGTAATC AGGCATTAGCAGCAAGCTATGCCGACTCTGATGTGCATTTTATTACTAAAGTCGGCTCAGACCATTTTAGCGATTACGCC ATTAATTTTATAAACTCATCAAAAATCCATAAAAGTGTTATCTACCAGACCAAAGAAACACAAACAGGTACAGCAACCAT CATGGTGAATGGAGATACCGGAGATAACGTCATCGCTATCTACCCTGGCGCCAACATGACAATTTCCCCTGATGAAATCA CCATTCAGAAAGAAGCCATTGTTCATTCAGATATTGTTCTTGTCCAACTGGAGACGAATTACGAAGCGCTGCAGCAAACA ATTCGTCTCGCACAAAAAAATGACATACCGGTCATCATCAATCCAGCGCCATACAATGACATGGTTAACACCATCATTGA TAACATTGACTATATTACGCCAAATGAAACGGAAGCAGGCCTGCTGGCCAATATGGCGGTTAATGATATCGAATCAGCCA AATGCGAGGCCAAAATTATTCATCAGAAAGGCGTCAAAAATACCATTATTACATTAGGTAGCAAAGGTTCGCTTGCTTAT GATGGCACACAATTCATCTATTCCCCGGCATTTCCGGCAGTTGTAAAAAATACGGCGGGAGCGGGTGACGCTTTCAATGG CGCCCTCGCATCTGGTCTTGCAAAAGGAAAGTCACTGGCATCCGCATTGTGCTACGCCAGCGCATTTGCCTCACTTGCGG TTGAAACGCCTAATGCCTCTGATATGCCGGAAAACGACTCCGTTCTTCATCGTATTCAGGGTTCACATTACAAACAAACT ATCTCTACTCACTAA Protein sequence : MKFERHHRILKELSISGVVKVSNLAKSLKVTKETIRSDLNELAGQGYLTRCHGGAFITLDSLDNVAKNEIAYVLEKYESA QKIKKGLSAMKNNVCVIGSFNVDIISYLPRLPSTGESLLADKFIFSPGGKGCNQALAASYADSDVHFITKVGSDHFSDYA INFINSSKIHKSVIYQTKETQTGTATIMVNGDTGDNVIAIYPGANMTISPDEITIQKEAIVHSDIVLVQLETNYEALQQT IRLAQKNDIPVIINPAPYNDMVNTIIDNIDYITPNETEAGLLANMAVNDIESAKCEAKIIHQKGVKNTIITLGSKGSLAY DGTQFIYSPAFPAVVKNTAGAGDAFNGALASGLAKGKSLASALCYASAFASLAVETPNASDMPENDSVLHRIQGSHYKQT ISTH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_1076 | YP_853096.1 | carbohydrate kinase | Not tested | PAI IV APEC-O1 | Protein | 1e-155 | 81 |
| orf408 | NP_460347.1 | regulatory protein | Not tested | SPI-2 | Protein | 3e-71 | 48 |
| ORF 408 | CAB37417.1 | - | Not tested | SPI-2 | Protein | 3e-71 | 48 |
| rbsk | YP_216390.1 | DeoR family transcriptional regulator | Not tested | SPI-2 | Protein | 5e-71 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SeD_A3918 | YP_002217505.1 | ribokinase | VFG0483 | Protein | 1e-71 | 48 |
