Gene Information

Name : SeD_A3464 (SeD_A3464)
Accession : YP_002217095.1
Strain : Salmonella enterica CT_02021853
Genome accession: NC_011205
Putative virulence/resistance : Unknown
Product : HpcH/HpaI aldolase/citrate lyase family protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG2301
EC number : -
Position : 3325787 - 3326629 bp
Length : 843 bp
Strand : -
Note : identified by match to protein family HMM PF03328

DNA sequence :
ATGCCCGATATTTCTCATACACCGACACGTAGCTGGCTTTTTACCCCAGCAATTCGACCAGAACGCTTCATAAAAGCAGT
TGAAAGTGCGGCGGACATTTCTATTATCGATCTTGAAGATTCCGTCACCCCGAATGACAAGGCGCAGGCCCGGAAAATTG
CGATGCAGTTCCTTTCATCCCGACCAAACTCATCGCTGAAAATAGCATTAAGAATTAATGGAATGAATACTCATGCTGGC
ATTGAAGACCTGCATATGTTACTGGAATGCCGTTTTTTTCCTGATTACATTATTCTTCCAAAAACAGAGTCAGCCGCGCA
CCTGCAAATCGTGGATAGTCTTATCATGATGGCTGGTTCTGATACTCGCCTTATTGGCATTATTGAGTCAGTTGTCGGAC
TTAATGCCGTAGAGTCTATTGCGGACGCCACCCCCAGACTCTGCGGGTTGATGTTTGGCGCCGCAGATATGGCGGCTGAC
ATTGGCGCCACACCCGCCTGGGAGCCTCTTGCGCTGGCGCGGGCCAGAATAGTGGCTGCCTGCGCTATGAAAGGGCTTCT
TGCAATAGATGCTCCCTTCTTTGATATAGGCGATTTTTCAGGTCTGAAAGAGGAAACGCTGCAGGCGCTCAGTTTTGGTT
TTTCTGCAAAATCGGCTATTCACCCCGCTCAGATTAGTGTAATCAACGCCGCATTTACTCCTACAACGGCAGAAATTAAT
CATGCTCGTGCAGTACTGACAGAGAATGCCAAAGGCGTCGGGATCGTTAGCGGCATGATGATAGATGCAGCCGTTGCCCG
TCAGGCCCGGAGATTACTCGCCCGGGCAGGGATCTTTTCCTGA

Protein sequence :
MPDISHTPTRSWLFTPAIRPERFIKAVESAADISIIDLEDSVTPNDKAQARKIAMQFLSSRPNSSLKIALRINGMNTHAG
IEDLHMLLECRFFPDYIILPKTESAAHLQIVDSLIMMAGSDTRLIGIIESVVGLNAVESIADATPRLCGLMFGAADMAAD
IGATPAWEPLALARARIVAACAMKGLLAIDAPFFDIGDFSGLKEETLQALSFGFSAKSAIHPAQISVINAAFTPTTAEIN
HARAVLTENAKGVGIVSGMMIDAAVARQARRLLARAGIFS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
citE AAK97548.1 CitE Not tested SPI-6 Protein 6e-113 100