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Name : SeD_A3202 (SeD_A3202) Accession : YP_002216861.1 Strain : Salmonella enterica CT_02021853 Genome accession: NC_011205 Putative virulence/resistance : Virulence Product : antigen presentation protein SpaN Function : - COG functional category : - COG ID : - EC number : - Position : 3079643 - 3080653 bp Length : 1011 bp Strand : - Note : identified by match to protein family HMM PF02510 DNA sequence : ATGGGCGATGTGTCAGCTGTCAGTTCATCCGGGAACATTTTACTGCCGCAGCAGGATGAGGTTGGCGGTTTATCAGAAGC ATTAAAAAAAGCGGTGGAAAAACATAAGACAGAATATTCCGGTGATAAAAAAGATCGCGACTATGGCGATGCTTTCGTAA TGCATAAAGAAACGGCTTTACCGGTATTACTGGCGGCATGGCGACATGGCGCGCCAGCGAAATCAGAACATCACAATGGC AACGTTTCTGGTCTGCATCATAACGGAAAAGGCGAACTCAGGATTGCTGAAAAACTGTTGAAAGTCACTGCTGAAAAATC TGTCGGTTTGATTTCTGCGGAGGCCAAAGTAGATAAATCCGCAGCGTTGCTATCGTCTAAAAATAGGCCGTTAGAAAGCG TAAGCGGTAAAAAATTATCTGCTGATTTAAAAGCCGTGGAGTCCGTTAGTGAAGTAGCCGATAACGCCACGGGAATCTCT GACGATAATATCAAGGCATTGCCTGGGGATAATAAAGCCATCGCGGGCGAAGGCGTTCGTAAAGAGGGCGCGCCGCTGGC GCGGGATGTCGCACCTGCCCGAATGGCCGCAGCCAATACCGGTAAGCTTGACGATAAAGATCATAAAAAGGTTAAAGATG TTTCTCAGCTTCCGCTGCAACCAACCACTATCGCCGATCTTAGCCAATTAACCGGCGGCGATGAAAAAATGCCTTTAGCG GCGCAATCAAAGCCGATGATGACTATTTTTCCGACTGCCGATGGCGTGAAAGGAGAGGATAGCTCGCTGACTTACCGTTT TCAGCGCTGGGGAAATGACTATTCCGTCAATATTCAGGCGCGGCAAGCAGGGGAGTTTTCGTTAATACCGTCAAATACGC AGGTTGAACATCGTTTGCATGATCAATGGCAAAACGGTAATCCCCAGCGCTGGCACCTGACGCGAGACGATCAACAAAAT CCGCAGCAGCAACAGCACAGACAGCAATCTGGCGAGGAGGATGACGCCTGA Protein sequence : MGDVSAVSSSGNILLPQQDEVGGLSEALKKAVEKHKTEYSGDKKDRDYGDAFVMHKETALPVLLAAWRHGAPAKSEHHNG NVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKSAALLSSKNRPLESVSGKKLSADLKAVESVSEVADNATGIS DDNIKALPGDNKAIAGEGVRKEGAPLARDVAPARMAAANTGKLDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLHDQWQNGNPQRWHLTRDDQQN PQQQQHRQQSGEEDDA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| spaN | NP_457286.1 | surface presentation of antigens protein (associated with type III secretion and virulence) | Virulence | SPI-1 | Protein | 8e-132 | 99 |
| spaN | NP_806495.1 | antigen presentation protein SpaN | Virulence | SPI-1 | Protein | 8e-132 | 99 |
| invJ | NP_461813.1 | needle length control protein | Virulence | SPI-1 | Protein | 1e-132 | 99 |
| invJ | YP_217811.1 | surface presentation of antigens; secretory proteins | Virulence | SPI-1 | Protein | 3e-133 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SeD_A3202 | YP_002216861.1 | antigen presentation protein SpaN | VFG0553 | Protein | 6e-133 | 99 |
