Gene Information

Name : SeD_A3071 (SeD_A3071)
Accession : YP_002216746.1
Strain : Salmonella enterica CT_02021853
Genome accession: NC_011205
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1819
EC number : -
Position : 2961074 - 2962189 bp
Length : 1116 bp
Strand : +
Note : identified by match to protein family HMM PF06722

DNA sequence :
ATGCGTATTCTGTTTGTCGGTCCACCACTGTATGGACTGCTATACCCTGTGCTGTCCCTGGCGCAAGCGTTTCGTGTTAA
TGGCCATGAAGTGCTGATTGCAAGCGGTGGAAAATTTGCACAGAAAGCAGCCGAAGCTGGGTTGGTGGTATTTGACGCTG
CGCCTGGTTTCGATTCGGAAGCGGGTTATCGCCGTCAGGAGGCATTACGAAAAGAAAATAACATTGGAACAAAAATGGGG
AACTTCTCATTCTTCAGCGAAGAGATGACTGACCCGCTGGTCGCGTTCGTCGGGCAGTGGCGACCAGATCTCATCGTCTA
CCCTCCCCTTGGGGTCGTTGGACCACTGATTGCCGCTAAGTATGACATTCCGGTAGTGATGCAAACCGTCGGCTTCGGTC
ATACGCCCTGGCACATCAAAGGCGTGACGAAATCACTTTCTAACGCCTACCGCCGCCATGGGGTCAGCGCGCCACCAAGA
GATCTGGCGTGGATAGACGTCACACCGCCCAGCATGAGCATACTGCAAAATGACGGAGAGCCGGTTATCTCCATGCAATA
CGTCCCGTATAACGGCGGCGCCGTCTGGGAAGAATGGTGGGAACGTACACCTGATCGCAAGCGTCTTCTGGTTAGCCTCG
GCACCGTCAAACCGATGGTGGATGGCCTGGATCTGATTTCCTGGGTAATGGATTCTGCCGGCGAAGTAGATGCCGAAATC
ATCCTGCATCTTCCGGCAAACGCCCGCTCGGATTTACGTTCGCTGCCGTCGAATGTCCGTCTGGTCGACTGGCTTCCGAT
GGGCGTTTTCCTTAACGGCGCCGACGGTTTTATCCACCATGGCGGCGCAGGCAACACCCTGACGGCGCTACATGCTGGCA
TTCCGCAGATAGTCTTTGGCCAGGGTGCCGACAGACCCGTCAATGCCCGCGCCGTGGTCGAGCGCGGATGCGGCATTATT
CCCGGTAAGAGCGGGCTTACGAGCAGCATGATCAATACCTTCCTCGGTAATCGCGCGCTTCGCGAGGCGTCGCAGGAGGT
CGCGGCGGAAATGGCGGCCCAGCCTTGCCCGACCGAGGTGGCAAAAAAACTGATCGCCATGCTGCAACACGGCTAA

Protein sequence :
MRILFVGPPLYGLLYPVLSLAQAFRVNGHEVLIASGGKFAQKAAEAGLVVFDAAPGFDSEAGYRRQEALRKENNIGTKMG
NFSFFSEEMTDPLVAFVGQWRPDLIVYPPLGVVGPLIAAKYDIPVVMQTVGFGHTPWHIKGVTKSLSNAYRRHGVSAPPR
DLAWIDVTPPSMSILQNDGEPVISMQYVPYNGGAVWEEWWERTPDRKRLLVSLGTVKPMVDGLDLISWVMDSAGEVDAEI
ILHLPANARSDLRSLPSNVRLVDWLPMGVFLNGADGFIHHGGAGNTLTALHAGIPQIVFGQGADRPVNARAVVERGCGII
PGKSGLTSSMINTFLGNRALREASQEVAAEMAAQPCPTEVAKKLIAMLQHG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iroB CAD66179.1 IroB protein Virulence PAI III 536 Protein 7e-151 87
Z1190 NP_286725.1 glucosyltransferase Not tested TAI Protein 2e-123 73
join NP_287133.1 glycosyl transferase Not tested TAI Protein 1e-122 72

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SeD_A3071 YP_002216746.1 hypothetical protein VFG1654 Protein 4e-151 87