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Name : SeD_A3051 (SeD_A3051) Accession : YP_002216727.1 Strain : Salmonella enterica CT_02021853 Genome accession: NC_011205 Putative virulence/resistance : Unknown Product : phage portal protein, pbsx family Function : - COG functional category : R : General function prediction only COG ID : COG5518 EC number : - Position : 2943387 - 2944418 bp Length : 1032 bp Strand : + Note : identified by match to protein family HMM PF04860; match to protein family HMM TIGR01540 DNA sequence : ATGGGAAAGAGTAAGAAAAACCGCGCTGCGGCGACGAATCAGCTCAAGCATAAAAGCCAAACTTCAGCCGAAGCATTCAG CTTTGGTGATCCCGTTCCTGTTCTGGACCGCCGTGAACTGCTGGACTATGTGGAATGCGTACAGATGGACCGCTGGTATG AGCCGCCCGTCAGCTTTGACGGACTGGCACGAACCTTCCGCGCCGCCGTGCATCACAGCTCACCAATTGCGGTGAAATGC AACATTCTGACCAGTACCTACATCCCTCACCCGCTGCTCAGCCAGCAGGCTTTTTCACGTTTTGTGCAGGACTATCTGGT ATTTGGTAACGCCTACCTGGAGAAACGCACGAACCGCTTCGGTGAAGTTATCGCCCTTGAGCCTGCTCTGGCAAAATACA CCCGACGCGGGTTAGACCTGGATACCTACTGGTTTGTGCAATACGGTATGACAACCCAGCCGTATCAGTTCACGAAAGGC AGCATTTTTCATCTGATGGAACCGGACATCAACCAGGAGATCTACGGCCTGCCAGGTTATCTTTCTGCCATTCCATCAGC CCTGCTCAACGAGTCCGCCACGCTGTTCCGCCGGAAGTATTACATTAACGGCAGTCATGCAGGCTTCATCATGTACATGA CCGATGCCGCGCAGAACCAAGAGGATGTGAACAACCTCCGCAATGCGATGAAAAGCGCCAAAGGCCCTGGCAACTTCCGC AACCTGTTTATGTACTCGCCTAACGGCAAAAAGGACGGGCTTCAGATCATCCCGTTGTCAGAAGTCGCGGCGAAGGATGA GTTTCTGAATATCAAGAACGTGAGCCGGGACGACATGATGGCGGCACACCGTGTGCCGCCGCAAATGATGGGGATAATGC CTAATAATGTTGGGGGGTTTGGGGATATCGAAAAAGCTAGCAAGGTATTTGTTAGGAATGAATTAACCCCCCTTCAGAAG CGATTTAGTGAGTTAAACGAATGGATTAATGAAAAAATAATCACTTACTCACAATATTCTATTGGAGACTAA Protein sequence : MGKSKKNRAAATNQLKHKSQTSAEAFSFGDPVPVLDRRELLDYVECVQMDRWYEPPVSFDGLARTFRAAVHHSSPIAVKC NILTSTYIPHPLLSQQAFSRFVQDYLVFGNAYLEKRTNRFGEVIALEPALAKYTRRGLDLDTYWFVQYGMTTQPYQFTKG SIFHLMEPDINQEIYGLPGYLSAIPSALLNESATLFRRKYYINGSHAGFIMYMTDAAQNQEDVNNLRNAMKSAKGPGNFR NLFMYSPNGKKDGLQIIPLSEVAAKDEFLNIKNVSRDDMMAAHRVPPQMMGIMPNNVGGFGDIEKASKVFVRNELTPLQK RFSELNEWINEKIITYSQYSIGD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4628 | NP_458710.1 | probable capsid portal protein | Not tested | SPI-7 | Protein | 2e-142 | 87 |
| t4321 | NP_807917.1 | capsid portal protein | Not tested | SPI-7 | Protein | 2e-142 | 87 |
| unnamed | ABR13463.1 | predicted capsid packaging protein | Not tested | PAGI-6 | Protein | 1e-87 | 54 |
