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Name : SeD_A3031 (SeD_A3031) Accession : YP_002216707.1 Strain : Salmonella enterica CT_02021853 Genome accession: NC_011205 Putative virulence/resistance : Unknown Product : major tail sheath protein Function : - COG functional category : R : General function prediction only COG ID : COG3497 EC number : - Position : 2928740 - 2929912 bp Length : 1173 bp Strand : - Note : identified by match to protein family HMM PF04984 DNA sequence : ATGGCTCAGGATTACCACCACGGGGTGCGCGTTGTTGAAATCAACGAAGGCACCCGACCTATTACCACGGTGAGCACTGC CATCGTGGGCATGGTCTGCACCGGCGATGATGCTGATGCGTCCGTGTTCCCCCTCAATAAGCCGGTCCTGCTGACTGATG TGCTCACCGCCAGCGGTAAAGCGGGGGAGTCCGGCACGCTGGCCCGCTCGCTGGACGCGATTGCAGATCAGGCAAAACCC GTAACTGTCGTTGTGCGTGTGGCGCAGGGCGAAACCGAAGCGGAAACCACCTCCAATATTATCGGCGGCGTAACTCCCGA CGGTAAGAAAACGGGCATGAAAGCGCTACTGTCGGCGCAGTCGCAGCTCGGTGTTAAGCCGCGCATTCTTGGGGTGCCGG GACATGACACTCAGGCCGTTGCTACTGAACTGCTGGGCGTGGCGCAAAGCTTGCGCGGGTTTGCCTACCTTGCTGCTAAT GGCTGCAAAACGGTGGAGGAAGCTATTGCCTATCGCGAGAATTTCAGTCAGCGCGAGGGAATGCTGATCTGGCCTGACTT CATCAACTTTGACACCGTGCTGAAAGCAGACGCCACGGCTTACGCCTCCGCCCGTGCGCTCGGCCTGCGTGCCAAAATCG ACGAGCAGATTGGCTGGCATAAAACCCTGTCCAATGTGGGTGTGAACGGTGTCACCGGCATTTCCGCTGATGTGTTCTGG GATCTGCAGGACCCGGCAACCGATGCGGGACTGCTGAACAAAAATGACGTCACCACATTGATCCGCAAAGACGGCTTCCG CTTCTGGGGTTCCCGTTGTCTCAGTGACGATCCGCTGTTTGCCTTTGAGAACTACACCCGCACGGCGCAGGTGCTGGCTG ACACTATGGCGGAGGCGCACATGTGGGCGGTGGATGGCGTGCTTAATCCGTCGCTGGCCCGCGACATTATTGAAGGACTA CGCGCCAAGATGCGCAGTCTGGTCAACCAGGGATACCTGATTGGTGGTGACTGCTGGCTGGATGAGTCCGTTAACGATAA AGACACCCTTAAAGCCGGGAAACTGACCATTGATTATGACTACACTCCGGTGCCTCCGCTTGAAAACCTGATGCTGCGCC AGCGCATCACCGATCGTTACCTGGTCGATTTTGCCAGCCGTGTCGCTGCATAA Protein sequence : MAQDYHHGVRVVEINEGTRPITTVSTAIVGMVCTGDDADASVFPLNKPVLLTDVLTASGKAGESGTLARSLDAIADQAKP VTVVVRVAQGETEAETTSNIIGGVTPDGKKTGMKALLSAQSQLGVKPRILGVPGHDTQAVATELLGVAQSLRGFAYLAAN GCKTVEEAIAYRENFSQREGMLIWPDFINFDTVLKADATAYASARALGLRAKIDEQIGWHKTLSNVGVNGVTGISADVFW DLQDPATDAGLLNKNDVTTLIRKDGFRFWGSRCLSDDPLFAFENYTRTAQVLADTMAEAHMWAVDGVLNPSLARDIIEGL RAKMRSLVNQGYLIGGDCWLDESVNDKDTLKAGKLTIDYDYTPVPPLENLMLRQRITDRYLVDFASRVAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4607 | NP_458690.1 | probable major tail sheath protein | Not tested | SPI-7 | Protein | 2e-180 | 99 |
| t4301 | NP_807898.1 | major tail sheath protein | Not tested | SPI-7 | Protein | 2e-180 | 99 |
| unnamed | ABR13484.1 | putative tail sheath protein | Not tested | PAGI-6 | Protein | 3e-125 | 70 |
