|
Name : SeD_A3030 (SeD_A3030) Accession : YP_002216706.1 Strain : Salmonella enterica CT_02021853 Genome accession: NC_011205 Putative virulence/resistance : Unknown Product : phage major tail tube protein FII Function : - COG functional category : R : General function prediction only COG ID : COG3498 EC number : - Position : 2928215 - 2928730 bp Length : 516 bp Strand : - Note : identified by match to protein family HMM PF04985; match to protein family HMM TIGR01611 DNA sequence : ATGGCTTTACCACGCAAGTTAAAACACCTGAACCTGTTCAACGACGGGAACAACTGGCAGGGGATCGTTGAGTCTCTGAC CCTGCCGAAATTTACCCGCAAGTTTGAGAAGTATCGCGGCGGCGGTATGCCGGGCGCAGTGGATGTGGACATGGGGCTGG ATGACGGCGCACTGGACACGGAATTTTCAATCGGCGGTACCGAGCTGCTGTTATTCAAGCAGATGGGCAAGGCAACCGTT GACGGCATCCAGCTGCGTTTCACAGGTTCCATTCAGCGTGACGATACCGGCGAAGTGCAGGCCGTTGAGCTGGTTGTGCG CGGGCGCCATAAAGAGGTGGATTCCGGCGAGTGGAAAACCGGCGAGAGCAGCAGCACCAAAGTCAGCAGTACCAACAGCT ACGCGAAGCTGACCATTAATGGTGAGGTGCTCTATGAGGTCGATCTGGTCAACATGGTAGAAATCGTTGGCGGCGTGGAC CTGATGGAAGAACACCGTAATGCCCTTGGCCTCTGA Protein sequence : MALPRKLKHLNLFNDGNNWQGIVESLTLPKFTRKFEKYRGGGMPGAVDVDMGLDDGALDTEFSIGGTELLLFKQMGKATV DGIQLRFTGSIQRDDTGEVQAVELVVRGRHKEVDSGEWKTGESSSTKVSSTNSYAKLTINGEVLYEVDLVNMVEIVGGVD LMEEHRNALGL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| t4300 | NP_807897.1 | major tail tube protein | Not tested | SPI-7 | Protein | 9e-70 | 100 |
| STY4606 | NP_458689.1 | probable major tail tube protein | Not tested | SPI-7 | Protein | 9e-70 | 100 |
| unnamed | ABR13485.1 | phage tail tube protein | Not tested | PAGI-6 | Protein | 2e-34 | 52 |
