Gene Information

Name : SeD_A2246 (SeD_A2246)
Accession : YP_002216009.1
Strain : Salmonella enterica CT_02021853
Genome accession: NC_011205
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2147528 - 2148535 bp
Length : 1008 bp
Strand : +
Note : -

DNA sequence :
ATGTTTTCTCGAGTCAGAGGTTTTCTTTCATGCCAGAACTATTCTCATACTGCAACTCCAGCTATTACTCTGCCTTCATC
AGGTAGTGCAAACTTTGCCGGAGTTGAATATCCTTTATTGCCATTAGATCAGCACACCCCCCTACTTTTTCAATGGTTTG
AACGAAACCCAAGCAGGTTTGGGGAAAACCAGATCCCAATTATTAATACTCAACAAAACCCCTATCTCAATAATATTATC
AACGCCGCTATAATAGAAAAAGAGAGAACTATCGGGGTTTTAGTTGATGGGAATTTTAGTGCTGGACAAAAGAAAGCATT
AGCAAAGCTGGAAAAACAATATGAAAATATAAAGGTTATCTATAATTCCGACCTGGATTATAGCATGTATGACAAGAAAC
TATCAGATATTTATTTAGAAAACATCGCTAAAATTGAAGCTCAACCAGCAAATGTCAGAGATGAATATCTGCTTGGTGAG
ATAAAAAAGAGTTTAAATGAAGTTTTAAAGAACAATCCAGAGGAGTCCCTTGTTTCGTCCCATGATAAACGCTTGGGACA
TGTACGGTTTGATTTTTACAGAAATCTTTTTTTATTAAAAGGAAGTAATGCTTTTCTGGAGGCGGGCAAACATGGCTGCC
ATCACCTGCAACCTGGAGGTGGCTGCATATATCTTGATGCTGATATGTTACTTACAGGTAAACTCGGCACTTTGTATTTA
CCTGATGGTATTGCTGTTCATGTAAGTCGTAAAGGTAATAGCATGAGTCTTGAAAATGGGATTATCGCCGTTAACCGCAG
CGAGCATCCGGCATTGAAAAAAGGACTTGAAATTATGCACAGTAAACCTTATGGCGATCCATACATTGATGGTGTCTGCG
GTGGGCTAAGGCATTATTTTAATTGTTCTATACGGCACAATTATGAAGAGTTTTGTAATTTTATAGAATTTAAGCATGAA
CATATTTTTATGGATACCAGCAGTTTGACTATCAGCTCCTGGAGATAA

Protein sequence :
MFSRVRGFLSCQNYSHTATPAITLPSSGSANFAGVEYPLLPLDQHTPLLFQWFERNPSRFGENQIPIINTQQNPYLNNII
NAAIIEKERTIGVLVDGNFSAGQKKALAKLEKQYENIKVIYNSDLDYSMYDKKLSDIYLENIAKIEAQPANVRDEYLLGE
IKKSLNEVLKNNPEESLVSSHDKRLGHVRFDFYRNLFLLKGSNAFLEAGKHGCHHLQPGGGCIYLDADMLLTGKLGTLYL
PDGIAVHVSRKGNSMSLENGIIAVNRSEHPALKKGLEIMHSKPYGDPYIDGVCGGLRHYFNCSIRHNYEEFCNFIEFKHE
HIFMDTSSLTISSWR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
st48 CAC81886.1 ST48 protein Not tested LEE II Protein 3e-81 57
unnamed CAI43815.1 hypothetical protein Not tested LEE Protein 3e-81 57
ECO111_3725 YP_003236064.1 T3SS secreted effector NleB Virulence LEE Protein 2e-80 57
nleB1 YP_003223426.1 T3SS effector NleB Virulence LEE Protein 1e-80 57
Z4328 NP_289553.1 hypothetical protein Not tested OI-122 Protein 9e-81 57
ECO26_5294 YP_003232174.1 T3SS effector NleB Virulence LEE Protein 4e-81 57
unnamed AAL57565.1 unknown Not tested LEE Protein 3e-81 57