|
Name : SeD_A0201 (SeD_A0201) Accession : YP_002214142.1 Strain : Salmonella enterica CT_02021853 Genome accession: NC_011205 Putative virulence/resistance : Unknown Product : glutamyl-Q tRNA(Asp) synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0008 EC number : 6.1.1.- Position : 213085 - 214026 bp Length : 942 bp Strand : - Note : this tRNA synthetase lacks the tRNA anticodon interaction domain; instead this enzyme modifies tRNA(Asp) with glutamate by esterifying glutamate to the 2-amino-5-(4,5-dihydroxy-2-cyclopenten-1-yl) moiety of queosine generating a modified nucleoside at the DNA sequence : ATGACAGGCGGGAGTTTTCCCGCCTTATTCTTTATTGCCCGCAGCATGACTGACTCACACTATATTGGCCGTTTCGCGCC GTCGCCATCCGGCGAACTGCATTTCGGCTCGTTAATCGCCGCCCTCGGCAGCTATCTACAAGCCCGTGCGCAACGCGGAA TTTGGCGCGTTCGCATCGAGGATATCGACCCCCCACGTGAAGTTCCCGGTGCCGCAGCGACCATTCTGCGCCAGCTGGAA CATTACGGCCTGCACTGGGATGGCGAGGTCTTATGGCAATCACAGCGTCATGAGGCTTATCGCGAGGCGCTGGCCTGGCT TCACGAGCAGGGACTGAGCTACTACTGCACTTGCCCCCGCTCGCGCATTCAGCGTCTGGGCGGTATTTACGACGGCCATT GCCGGACGTTATGCCACGGGCCGGAGAATGCCGCCGTCAGAATTAAACAGCAGCATCCGGTGATGCATTTCCATGATGCC TTGCGCGGCGACATCCAGGCTGACCCACAGCTGGCGAGCGAAGATTTTATTATCCACCGCCGCGACGGACTGTTTGCTTA TAACCTGGCCGTGGTGGTCGACGATCATTTTCAGGGGGTGACGGAGATCGTCCGCGGCGCAGATTTAATCGAACCCACTG TCCGACAACTTTCGCTGTATAAACAGTTTGGCTGGCGTGCGCCAGGCTACGTGCACCTTCCGCTGGCGCTCAACGAACAA GGCGCTAAACTTTCCAAGCAAAATCATGCCCCTGCGCTTGCGACAGGCGATCCGCGCCCGGTACTGGTCCAGGCATTGCG CTTTTTAGGCCAACGCGACGTCGTAGCGTGGCAGGAGATGTCTGTTGAGGAGTTGCTGCGCTTTGCGGTGGCGCACTGGA GGCTTACAGCCGTACCCACATCGGCTAATGTAAATCCGGCATTCTCAAATGCGTCTCGCTGA Protein sequence : MTGGSFPALFFIARSMTDSHYIGRFAPSPSGELHFGSLIAALGSYLQARAQRGIWRVRIEDIDPPREVPGAAATILRQLE HYGLHWDGEVLWQSQRHEAYREALAWLHEQGLSYYCTCPRSRIQRLGGIYDGHCRTLCHGPENAAVRIKQQHPVMHFHDA LRGDIQADPQLASEDFIIHRRDGLFAYNLAVVVDDHFQGVTEIVRGADLIEPTVRQLSLYKQFGWRAPGYVHLPLALNEQ GAKLSKQNHAPALATGDPRPVLVQALRFLGQRDVVAWQEMSVEELLRFAVAHWRLTAVPTSANVNPAFSNASR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00313 | YP_008207778.1 | Glutamyl- and glutaminyl-tRNA synthetase | Not tested | AbaR25 | Protein | 9e-52 | 43 |
| BJAB0868_00317 | YP_008211643.1 | Glutamyl- and glutaminyl-tRNA synthetase | Not tested | AbaR26 | Protein | 9e-52 | 43 |
