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Name : SeD_A1963 (SeD_A1963) Accession : YP_002215748.1 Strain : Salmonella enterica CT_02021853 Genome accession: NC_011205 Putative virulence/resistance : Virulence Product : amino acid transporter Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0531 EC number : - Position : 1894928 - 1896271 bp Length : 1344 bp Strand : + Note : identified by match to protein family HMM PF00324 DNA sequence : ATGAAAAAAGTCAAAAAATTGTCTCTTACCGATTTAGTGCTTTATGCTCTGGTGTTTATGGTGCCTATCGCGCCAGTCTC TCTTTATGGCGTCGTTTATAATCTTTCGCACGGTATGGTTGCGCTGGTTTATATTATTGGCGCTATCGCGATGTTTTTTA CCGCGTACAGCTACTCTACCTTATCGCAGCATATCTCCTCGTCGGGTTCGGCCTATGCGTATGCTGGCGTATGCATTAAT CCCGCCGTAGGGTTTCTGACCGGATGGATATTACTGCTGGATTATCTTTTGTTCCCTACGCTCGTGGCAGTGCTGGGCGG CGTCGCGGTCCACGCTATTTTACCGCAAATCCCGGTCTGGGTCTGGCCGTTGATTTATGTGGCTATCGGCACCGGAGTCA ACTATCTCGGGATACAGCAAACGGCGAAATTCGATAAGTTACTGGTCTTTATTCAACTCGGTATTCTGGCGATTTTCGTG CTACTCATTGTCCGTCTGATGCTGCTGGACAGTAGTCAGATAACGCTTTCCTTCCGGCCTTTTTTCGATTCACAGTGGTT CACCCCAGGGCTCATCGCGACGGCGATTTCGGTGGCTGCGCTGAACTTTCTCGGCTTTGACGCTATCAGTACATTAAGTG AAGAAAGCGAAGGCGGGGGACGCGCCGTCAGTAAAGCAACGCTGTTGGCGTTAGTTTTGGCGACGGTACTGTTTATTATC GTTGTGGCGTTTGCGGCGTTCGCCACCGGTAATGTCGACCGCTTCGCGGAAGGCAATGCGACGAATGAAGCATTTTTCAC CATTGCCGGCAACGTTGGCGGTATCTGGCTCAAAGTGGCATTTTCCATCATTGTGGCGTTTGTGTGCGCCGTCGGCAACA TTATTACCGCGCAAACGGCGGTGTCCAGAGTGCTATTTTCAATGGGGCGCGACCGAATGTTGCCCGCCTTCCTCGCTCAC GTCCATACCACGCGTAAAACGCCGGATTATGCCATTCTGTTTACCGGCGGCGTCACCCTGCTGCTCAGCTACCTGTTTTC CGGCAAGATTGAGTCTATCTCCACGCTGGTGAACTTTGGCGCGCTTTTCGCTTTTTTTGTCGTGAGCCTGTGTGTGTTTA TCCTGTTCAATTTCCGGATGAAAGCCCAGCGGCGCATTTTCGCCCATGTCATTTCGCCGATCATGGGGATGATCGTCATC GGCTACGTCTGTTTAAACATGAACATTCACGCTCTGATACTCGGAATTAGCTGGGCGGCGATCGGGATAGCGATTCTGTG CTATCGAAAAGCACATAACCAAAACATCGCCATCGACCTGGAAGGCAAAAAGTTGCTCGATTGA Protein sequence : MKKVKKLSLTDLVLYALVFMVPIAPVSLYGVVYNLSHGMVALVYIIGAIAMFFTAYSYSTLSQHISSSGSAYAYAGVCIN PAVGFLTGWILLLDYLLFPTLVAVLGGVAVHAILPQIPVWVWPLIYVAIGTGVNYLGIQQTAKFDKLLVFIQLGILAIFV LLIVRLMLLDSSQITLSFRPFFDSQWFTPGLIATAISVAALNFLGFDAISTLSEESEGGGRAVSKATLLALVLATVLFII VVAFAAFATGNVDRFAEGNATNEAFFTIAGNVGGIWLKVAFSIIVAFVCAVGNIITAQTAVSRVLFSMGRDRMLPAFLAH VHTTRKTPDYAILFTGGVTLLLSYLFSGKIESISTLVNFGALFAFFVVSLCVFILFNFRMKAQRRIFAHVISPIMGMIVI GYVCLNMNIHALILGISWAAIGIAILCYRKAHNQNIAIDLEGKKLLD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| t1247 | NP_805052.1 | amino acid permease | Not tested | SPI-2 | Protein | 1e-176 | 99 |
| ycjj | YP_216387.1 | amino acid permease | Not tested | SPI-2 | Protein | 2e-178 | 99 |
| orf48 | NP_460344.1 | amino acid permease | Not tested | SPI-2 | Protein | 2e-178 | 99 |
| ORF48 | CAA68204.1 | amino acid permease YeeF like protein | Not tested | SPI-2 | Protein | 3e-174 | 99 |
| STY1743 | NP_456146.1 | putative amino acid permease | Not tested | SPI-2 | Protein | 1e-176 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SeD_A1963 | YP_002215748.1 | amino acid transporter | VFG0480 | Protein | 8e-179 | 99 |
