Gene Information

Name : SeD_A1962 (SeD_A1962)
Accession : -
Strain : Salmonella enterica CT_02021853
Genome accession: NC_011205
Putative virulence/resistance : Unknown
Product : -
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1894013 - 1894906 bp
Length : 894 bp
Strand : +
Note : proline iminopeptidase like protein; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF00561; match to protein family HMM TIGR01250

DNA sequence :
ATGAATGATACTTATCTCTATGGCGAAATGTTTTCTGAAAACATATTGACAAGCTATCGGATTTATGGAGACAGAAAATC
ATTACTCACGCCGCTCATTATCCTTCATGGCGGCCCTTCTGGCGGCTTTGATTATTTATTAAATTATCGCCGTCTGGCTG
ATGACGGGCGCATGGTAATATTTTACGATCAATATGGCTGCGGTCGTTCAACGCATTTTCCTCATGCTGACGCGTCTTTC
TGGACTATTGCGCGTTATCTCAGTCAATTAACCCAATTAATTCATCACCTGGGTATTGGACACGGGTATTCGATACTGGG
ACATTCCTGGGGCGGAATGCTTGCCGCAGAGCACGCCTGCTTACAGCCTGCCGGGCTTCGCGGGACGATACTGGCCAGTT
CGCCGGCCAGTATCGCCCTGTGGCAACAGGAAGCCATACGGCTCTTTAACGCTCTGACGCCAATGTCCGATGACGATATC
AAAAACGTCATTATGCCCGCCGTCATTTATCAAAACCCACCGGAACAGCTGGTCGCTTATTATGCCAGACACGTTTATAC
CCTCGCGGAAGAAGCCGTTCATGTTCAGCGCTCTAATGCGCAGTTCGCCGCCGACCCTACGGGTTATCACATTTTATGGG
GAACCAATGAACTGGCGGCAAATGGCAAACTTGCCGACTGGGATATTACGCCCCATTTGTGCCAGATACGCTGTCCTGTT
CTGGTACTGCGCGGCGAAAACGATCAGGCAACCGAGCGCGTCGTCTCTCCGCTTCTCTCTCACATTTCAGACTGCCGCGC
GGTCACTATTCCTGGCAGCAGCCATAACCCGCATGAAGAAAATATCGCGCCCTGCCTCGCAGCGGTAAGCGCGTTTTTAC
GCGATCTGGCATAA

Protein sequence :
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pip YP_216388.1 hydrolase or acyltransferase Not tested SPI-2 DNA 0.0 99.6
orf32 NP_460345.1 proline iminopeptidase Not tested SPI-2 DNA 0.0 99.6
ORF32 CAA68203.1 proline iminopeptidase like protein Not tested SPI-2 DNA 0.0 99.5
STY1742 - putative pathogenicity island protein (pseudogene) Not tested SPI-2 DNA e-224 98.8
t1248 - - Not tested SPI-2 DNA e-224 98.8