Gene Information

Name : SeD_A1961 (SeD_A1961)
Accession : YP_002215747.1
Strain : Salmonella enterica CT_02021853
Genome accession: NC_011205
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG5426
EC number : -
Position : 1893217 - 1893954 bp
Length : 738 bp
Strand : +
Note : identified by match to protein family HMM PF07090

DNA sequence : 
ATGAAAATTTTATTTATTGGCGAATCCTGGCACATTCATATGATTCACTCTAAAGGTTTTGATAGCTTTACATCGAGCAA
ATATGAAGAAGGCGCAGACTATTTATTATCCTGCTTACGCCAGGGTAATATCGATGTGGACTACATGCCTGCCCATATTG
TGCAAACTCGTTTTCCACATACCGCCGAAGCATTAGCCTGCTATGATGCGATCGTCATCAGTGATATCGGTAGCAATACG
TTCCTGCTACAAAACAGAACGTTTTATAATATGGACATTATTCCTGATGCATTACAACTTATCGCCGATTATGTTGCTGA
GGGCGGCGGTCTGTTGATGATCGGCGGGTATTTATCCTTTACGGGAATAGAAGCAAAAGCCAATTATAAAAATACGGTTC
TGGCGGAGGTATTGCCGGTTGATATGCTGGATGTAGATGACCGCGTAGAACTACCGCAAGGATGTAAAGCAGTAAATACT
GCGGTAGAGCATGTTATTACCCAGCCATTTAGCGAATGGCCGCCGCTGTTGGGCTATAACAAGCTTATCGCCAAAGAAAA
TAGTCAAGTCCTTGCTGAAATTAATGGCGATCCACTGTTAGTTATGGGTACTTACCATAAAGGGAAAGTATGTTGCTTTG
CCAGTGATTGTTCGCCGCACTGGGGAAGCCCGCAGTTTCTGCAATGGGAACATTACGCCACCTTCTGGTGTAATGTTTTA
CACACAATAAAAAAATAA

Protein sequence : 
MKILFIGESWHIHMIHSKGFDSFTSSKYEEGADYLLSCLRQGNIDVDYMPAHIVQTRFPHTAEALACYDAIVISDIGSNT
FLLQNRTFYNMDIIPDALQLIADYVAEGGGLLMIGGYLSFTGIEAKANYKNTVLAEVLPVDMLDVDDRVELPQGCKAVNT
AVEHVITQPFSEWPPLLGYNKLIAKENSQVLAEINGDPLLVMGTYHKGKVCCFASDCSPHWGSPQFLQWEHYATFWCNVL
HTIKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1741 NP_456145.1 Orf 245 protein Not tested SPI-2 Protein 3e-113 99
t1249 NP_805053.1 hypothetical protein Not tested SPI-2 Protein 3e-113 99
SC1402 YP_216389.1 hypothetical protein Not tested SPI-2 Protein 1e-113 99
orf245 NP_460346.1 hypothetical protein Not tested SPI-2 Protein 1e-113 99
ORF 245 CAB37418.1 - Not tested SPI-2 Protein 9e-114 99
APECO1_1077 YP_853097.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 5e-79 66

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SeD_A1961 YP_002215747.1 hypothetical protein VFG0482 Protein 5e-114 99