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Name : SeD_A1956 (SeD_A1956) Accession : YP_002215742.1 Strain : Salmonella enterica CT_02021853 Genome accession: NC_011205 Putative virulence/resistance : Virulence Product : sensor-kinase Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG4191 EC number : - Position : 1884884 - 1886632 bp Length : 1749 bp Strand : - Note : identified by match to protein family HMM PF00512; match to protein family HMM PF02518 DNA sequence : GTGTTGGCGGCAGTAGGGCTACTTTGTCATGGCGCGTGGGCAGGGACGTGGAATATCGGTATTTTGGCCATGCGCGGCGA GGCGTCTACGCGTAGCCACTGGCAACCGTTGGCAAAGACATTAAGCCAACAGTTTCCAGGCGAAACCTTTCATATCCAGC CGCTGGATCTGCATCAAATGCAGGAAGCCGTTAACCAGGGAACCGTGCAGTTTGTGATAACCAACCCGGCGCAATTTGTC CAACTGAACAGCCATGCGCCGCTGCGCTGGTTAGCTTCCCTGCGTTCCACGCGCGATGGGAAAGCGGTGAGTAATGTTAT TGGCAGCGTGATTTTGACCCGGCGCGATAGCGGCATCACCACGGCGCATGATCTCATCGGTAAGACAGTCGGCGCGATTG ATGCTCAGGCGTTTGGCGGCTATTTATTAGGCTATAAAGCGCTCAGCGACGCGGGCTTACGCCCGGAGCGCGATTTTCAT CTTCGTTTTACCGGATTTCCTGGCGATGCCTTAGTCTATATGCTGCGCGAAAAAGCGGTGCAGGCGGCAATTGTGCCAGT GTGCCTGTTAGAAAATATGGATCAGGAAGGATTGATTAATAAAAAGGACTTTATCGCGCTGCTTTCCCGACCGACGCCAC TGCCTTGCTTAACCAGTACGCCGTTATATCCTGACTGGTCGTTCGCGGCGCTACCTGCGGTAAGCGATGCGCTGGCGGAT CGCGTAACGCGAGCGCTATTCAACGCGCCCGCCGCCGCGTCATTTCACTGGGGCGCGCCAGCGTCGACCAGTCAGGTGGA AGCTTTGCTGCGTGATGTTCGTCAGCACCCTCAGCAGCGCCGACTGTGGCTGGATGTCAAAAGTTGGTTAATCCAGCACC AGCTAATGGTCGGTGGCGTGATTCTGGCGTTCCTGTTGCTCACGCTCAATTATATTTGGGTCATGCTGCTGGTGCGTCGA CGCGGAAAACAACTGGAACGTAATAATGTAGTCCTTCATCAGCATGAGCGGGCGCTGGAAACCGCCCGGCAAATGAGCGT GTTGGGTGAAATGACCTCCGGGTTTGCCCATGAGCTTAATCAGCCGCTTTCCGCGATTCGACATTATGCCCAGGGGTGCC TGATTCGACTGCGCGCTGCAGATGAACAGCATCCCTTGCTGCCGGCGCTGGAGCAGATTGACCAGCAGGCGCAACGCGGT GCGGATACTCTGCGTAACCTGCGTCACTGGGTCAGCCAGGCGCAGGGCAACCCGGTGCTAACCGAAGCGTGGAAGGCCAT AGCCATTCGCGAGGCGATTGATCATGTCTGGCAATTGTTGCGTATGGCGCAACAGTTTCCGACAGTGACTCTGCATACCG AGGTTAGCGCTGCGCTGCGCGTAACGCTGCCGTCAGTGCTGCTGGAACAGGTGCTGGCGAATATCATTCTTAATGCGGCT CAGGCGGGCGCCACCCATTTATGGGTCGTTGCTGAACGCACTGAACACGGCATCAGTATCGCTTTACAGGATAACGCCGG GGGAATCGATGAGGCGCTATTACGTCAGGCGTTTCAGCCGTTTATGACCACCCGCAAAGAGGGGATGGGCTTAGGGCTGG CGATTTGCCAGCGGCTGGTGCGGTATGGGCGGGGCGATATCAGTATCAGGAACCAGACCGCGCCGGACGGTCTGTCGGGA ACGGTGGTCACGATACATTTCTTACATGAAAATGGGGGCAGGGATGGCGACAATTCATCTACTGGATGA Protein sequence : MLAAVGLLCHGAWAGTWNIGILAMRGEASTRSHWQPLAKTLSQQFPGETFHIQPLDLHQMQEAVNQGTVQFVITNPAQFV QLNSHAPLRWLASLRSTRDGKAVSNVIGSVILTRRDSGITTAHDLIGKTVGAIDAQAFGGYLLGYKALSDAGLRPERDFH LRFTGFPGDALVYMLREKAVQAAIVPVCLLENMDQEGLINKKDFIALLSRPTPLPCLTSTPLYPDWSFAALPAVSDALAD RVTRALFNAPAAASFHWGAPASTSQVEALLRDVRQHPQQRRLWLDVKSWLIQHQLMVGGVILAFLLLTLNYIWVMLLVRR RGKQLERNNVVLHQHERALETARQMSVLGEMTSGFAHELNQPLSAIRHYAQGCLIRLRAADEQHPLLPALEQIDQQAQRG ADTLRNLRHWVSQAQGNPVLTEAWKAIAIREAIDHVWQLLRMAQQFPTVTLHTEVSAALRVTLPSVLLEQVLANIILNAA QAGATHLWVVAERTEHGISIALQDNAGGIDEALLRQAFQPFMTTRKEGMGLGLAICQRLVRYGRGDISIRNQTAPDGLSG TVVTIHFLHENGGRDGDNSSTG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ttrS | CAB37413.1 | TtrS | Virulence | SPI-2 | Protein | 0.0 | 99 |
| ttrS | YP_216394.1 | tetrathionate reductase complex: sensory transduction histidine kinase | Virulence | SPI-2 | Protein | 0.0 | 99 |
| ttrS | NP_805057.1 | hypothetical protein | Virulence | SPI-2 | Protein | 0.0 | 99 |
| ttrS | NP_460351.1 | sensory histidine kinase | Virulence | SPI-2 | Protein | 0.0 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SeD_A1956 | YP_002215742.1 | sensor-kinase | VFG0487 | Protein | 0.0 | 99 |
