Name : SeD_A1945 (SeD_A1945) Accession : YP_002215733.1 Strain : Salmonella enterica CT_02021853 Genome accession: NC_011205 Putative virulence/resistance : Virulence Product : secretion system effector SseB Function : - COG functional category : - COG ID : - EC number : - Position : 1873524 - 1874114 bp Length : 591 bp Strand : - Note : identified by match to protein family HMM PF03433 DNA sequence : ATGTCTTCAGGAAACATCTTATGGGGAAGTCAAAACCCTATTGTGTTTAAAAATAGCTTCGGCGTCAGCAACGCTGATAC CGGGAGCCAGGATGACTTATCCCAGCAAAATCCGTTTGCCGAAGGGTATGGTGTTTTGCTTATTCTCCTTATGGTTATTC AGGCTATCGCAAATAATAAATTTATTGAAGTCCAGAAGAACGCTGAACGTGCCAGAAATACCCAGGAAAAGTCAAATGAG ATGGATGAGGTGATTGCTAAAGCAGCCAAAGGGGATGCTAAAACCAAAGAGGAGGTGCCTGAGGATGTAATTAAATACAT GCGTGATAATGGTATTCTCATCGATGGTATGACCATTGATGATTATATGGCTAAATATGGCGATCATGGGAAGCTGGATA AAGGTGGCCTACAGGCGATCAAAGCGGCTTTGGATAATGACGCCAACCGGAATACCGATCTTATGAGTCAGGGGCAGATA ACAATTCAAAAAATGTCTCAGGAGCTTAACGCTGTCCTTACCCAACTGACAGGGCTTATCAGTAAGTGGGGGGAAATTTC CAGTATGATAGCGCAGAAAACGTACTCATGA Protein sequence : MSSGNILWGSQNPIVFKNSFGVSNADTGSQDDLSQQNPFAEGYGVLLILLMVIQAIANNKFIEVQKNAERARNTQEKSNE MDEVIAKAAKGDAKTKEEVPEDVIKYMRDNGILIDGMTIDDYMAKYGDHGKLDKGGLQAIKAALDNDANRNTDLMSQGQI TIQKMSQELNAVLTQLTGLISKWGEISSMIAQKTYS |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
sseB | NP_456130.1 | putative pathogenicity island effector effector protein | Virulence | SPI-2 | Protein | 1e-86 | 100 |
sseB | NP_805069.1 | pathogenicity island effector protein | Virulence | SPI-2 | Protein | 1e-86 | 100 |
sseB | NP_460363.1 | translocation machinery component | Virulence | SPI-2 | Protein | 1e-86 | 100 |
sseB | AAC28879.1 | putative secreted protein | Virulence | SPI-2 | Protein | 9e-87 | 100 |
sseB | CAA12185.1 | SseB | Virulence | SPI-2 | Protein | 9e-87 | 100 |
sseB | YP_216406.1 | secretion system effector protein SseB | Virulence | SPI-2 | Protein | 5e-86 | 97 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
SeD_A1945 | YP_002215733.1 | secretion system effector SseB | VFG0499 | Protein | 4e-87 | 100 |