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Name : SeD_A1944 (SeD_A1944) Accession : YP_002215732.1 Strain : Salmonella enterica CT_02021853 Genome accession: NC_011205 Putative virulence/resistance : Virulence Product : type III secretion low calcium response chaperone LcrH/SycD Function : - COG functional category : S : Function unknown COG ID : COG1729 EC number : - Position : 1873054 - 1873569 bp Length : 516 bp Strand : - Note : identified by match to protein family HMM PF07719; match to protein family HMM PF07720; match to protein family HMM TIGR02552 DNA sequence : GTGGGGGGAAATTTCCAGTATGATAGCGCAGAAAACGTACTCATGAAAAAAGACCCGACCCTACAACAGGCACATGACAC GATGCGGTTTTTCCGGCGTGGCGGCTCGCTGCGTATGTTGTTGGATGACGATGTTACACAGCCGCTTAATACTCTGTATC GCTATGCCATGCAGCTTATGGAGGTAAAAGAGTTCGCCGGCGCAGCGCGACTTTTTCAATTGTTGACGATATATGATGCC TGGTCATTTGACTACTGGTTTAGGTTAGGGGAATGCTGCCAGGCTCAAAAACATTGGGGGGAAGCGATATACGCTTATGG ACGCGCGGCACAAATTAAGATTGATGCGCCGCAGGCGCCATGGGCCGCAGCGGAATGCTATCTCGCGTGTGATAACGTCT ATTATGCAATCAAAGCGTTAAAGGCCGTGGTGCGTATTTGCGGCGAGGTCAGTGAACATCAAATTCTCCGACAGCGTGCA GAAAAGATGTTACAGCAACTTTCTGACAGGAGCTAA Protein sequence : MGGNFQYDSAENVLMKKDPTLQQAHDTMRFFRRGGSLRMLLDDDVTQPLNTLYRYAMQLMEVKEFAGAARLFQLLTIYDA WSFDYWFRLGECCQAQKHWGEAIYAYGRAAQIKIDAPQAPWAAAECYLACDNVYYAIKALKAVVRICGEVSEHQILRQRA EKMLQQLSDRS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SC1420 | YP_216407.1 | secretion system chaperone protein SscA | Virulence | SPI-2 | Protein | 2e-68 | 99 |
| sscA | NP_456129.1 | putative Type III secretion system chaperone protein | Virulence | SPI-2 | Protein | 8e-69 | 99 |
| sscA | NP_805070.1 | type III secretion system chaperone protein | Virulence | SPI-2 | Protein | 8e-69 | 99 |
| sscA | NP_460364.1 | secretion system chaperone | Virulence | SPI-2 | Protein | 3e-69 | 99 |
| sscA | AAC28880.1 | putative secretion chaperone | Virulence | SPI-2 | Protein | 2e-69 | 99 |
| sscA | CAA12186.1 | SscA | Virulence | SPI-2 | Protein | 2e-69 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SeD_A1944 | YP_002215732.1 | type III secretion low calcium response chaperone LcrH/SycD | VFG0500 | Protein | 9e-70 | 99 |
