Gene Information

Name : SeD_A1938 (SeD_A1938)
Accession : YP_002215726.1
Strain : Salmonella enterica CT_02021853
Genome accession: NC_011205
Putative virulence/resistance : Virulence
Product : secreted effector protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1868605 - 1869294 bp
Length : 690 bp
Strand : -
Note : -

DNA sequence : 
ATGAAACCTGTTAGCCCAAATGCTCAGGTAGGAGGGCAACGTCCTGTTAACGCGCCTGAGGAATCACCTCCATGTCCCTC
ATTGCCACATCCGGAAACCAATATGGAGAGTGGTAGAATAGGTCCTCAACAAGGAAAAGAGCGGTTATTGGCCGGACTTG
CGAAACGAGTGATAGAGTGTTTTCCAAAAGAAATTTTTAGTTGGCAAACGGTTATTTTGGGCGGACAGATTTTATGCTGT
TCCGCTGGAATAGCATTAACAGTGCTAAGTGGTGGAGGCGCGCCGCTCGTAGCCCTGGCAGGGATTGGCCTTGCTATTGC
CATCGCGGATGTCGCCTGTCTTATCTACCATCATAAACATCATTTGCCTATGGCTCACGACAGTATAGGCAATGCCGTTT
TTTATATTGCTAATTGTTTCGCCAATCAACGCAAAAGTATGGCGATTGCTAAAGCCGTCTCCCTGGGCGGTAGATTAGCC
TTAACCGCGACGGTAATGACGCATTCATACTGGAGTGGTAGTTTGGGACTACAGCCTCATTTATTAGAGCGTCTTAATGA
TATTACCTATGGACTAATGAGTTTTACTCGCTTCGGTATGGATGGGATGGCAATGACCGGTATGCAGGTCAGCAGCCCAT
TATATCGTTTGCTGGCTCAGGTAACGCCAGAACAACGTGCGCCGGAGTAA

Protein sequence : 
MKPVSPNAQVGGQRPVNAPEESPPCPSLPHPETNMESGRIGPQQGKERLLAGLAKRVIECFPKEIFSWQTVILGGQILCC
SAGIALTVLSGGGAPLVALAGIGLAIAIADVACLIYHHKHHLPMAHDSIGNAVFYIANCFANQRKSMAIAKAVSLGGRLA
LTATVMTHSYWSGSLGLQPHLLERLNDITYGLMSFTRFGMDGMAMTGMQVSSPLYRLLAQVTPEQRAPE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sseG NP_456123.1 putative pathogenicity island effector protein Virulence SPI-2 Protein 1e-92 99
sseG NP_805076.1 pathogenicity island effector protein Virulence SPI-2 Protein 1e-92 99
sseG NP_460370.1 secreted effector protein Virulence SPI-2 Protein 1e-93 99
sseG YP_216413.1 secretion system effector protein SseG Virulence SPI-2 Protein 1e-93 99
sseG AAC28873.1 SseG Virulence SPI-2 Protein 8e-94 99
sseG CAA12192.1 SseG Virulence SPI-2 Protein 8e-94 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SeD_A1938 YP_002215726.1 secreted effector protein VFG0506 Protein 5e-94 99