Name : SeD_A1935 (SeD_A1935) Accession : YP_002215723.1 Strain : Salmonella enterica CT_02021853 Genome accession: NC_011205 Putative virulence/resistance : Virulence Product : type III secretion system apparatus protein Function : - COG functional category : - COG ID : - EC number : - Position : 1867768 - 1868031 bp Length : 264 bp Strand : - Note : identified by match to protein family HMM TIGR02497 DNA sequence : TTGAATATTTCTGATATGAGCGTAGTGCCTGTAAGCACTCAATCTTATGTAAAGTCCTCTGCAGAACCGAGCCAGGAGCA AATTAATTTTTTTGAACAATTGCTGAAAGATGAAGCATCCACCAGTAACGCCAGTGCTTTATTACCGCAGGTTATGTTGA CCAGACAAATGGATTATATGCAGTTAACGGTAGGCGTCGATTATCTTGCCAGAATATCAGGCGCAGCATCGCAAGCGCTT AATAAGCTGGATAACATGGCATGA Protein sequence : MNISDMSVVPVSTQSYVKSSAEPSQEQINFFEQLLKDEASTSNASALLPQVMLTRQMDYMQLTVGVDYLARISGAASQAL NKLDNMA |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
ssaI | NP_460373.1 | type III secretion system apparatus protein | Virulence | SPI-2 | Protein | 7e-32 | 100 |
ssaI | CAA12195.1 | SsaI | Virulence | SPI-2 | Protein | 5e-32 | 100 |
ssaI | AAX49622.1 | SsaI | Virulence | SPI-2 | Protein | 5e-32 | 100 |
ssaI | YP_216416.1 | secretion system apparatus protein SsaI | Virulence | SPI-2 | Protein | 6e-31 | 97 |
ssaI | NP_456120.1 | putative pathogenicity island protein | Virulence | SPI-2 | Protein | 2e-30 | 94 |
ssaI | NP_805079.1 | pathogenicity island protein | Virulence | SPI-2 | Protein | 2e-30 | 94 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
SeD_A1935 | YP_002215723.1 | type III secretion system apparatus protein | VFG0509 | Protein | 2e-32 | 100 |