Gene Information

Name : SeD_A1927 (SeD_A1927)
Accession : YP_002215716.1
Strain : Salmonella enterica CT_02021853
Genome accession: NC_011205
Putative virulence/resistance : Virulence
Product : secretion system apparatus SsaO
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1860676 - 1861053 bp
Length : 378 bp
Strand : -
Note : -

DNA sequence : 
ATGGAAACTTTGCTGGAGATAATCGCGCGGCGTGAAAAGCAATTACGCGGCAAGCTTACCGTACTTGATCAGCAGCAACA
GGCGATTATTACGGAACAGCAGATTTGCCAGACGCGCGCTTTAGCAGTGTCTACCAGACTGAAAGAATTAATGGGCTGGC
AAGGTACGTTATCTTGTCATTTATTGTGGGATAAGAAACAACAAATGGCCGGGTTATTCACTCAGGCGCAGAGCTTTTTG
ACGCAACGGCAGCAGTTAGAGAATCAGTATCAGCAGCTTGTCTCCCGGCGAAGCGAATTACAGAAGAATTTTAATGCGCT
TATGAAAAAGAAAGAAAAAATTACTATGGTATTAAGCGATGCGTATTACCAAAGTTGA

Protein sequence : 
METLLEIIARREKQLRGKLTVLDQQQQAIITEQQICQTRALAVSTRLKELMGWQGTLSCHLLWDKKQQMAGLFTQAQSFL
TQRQQLENQYQQLVSRRSELQKNFNALMKKKEKITMVLSDAYYQS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaO NP_460381.1 type III secretion system apparatus protein Virulence SPI-2 Protein 3e-36 99
ssaO CAA70538.1 secretion system apparatus Virulence SPI-2 Protein 2e-36 99
ssaO YP_216424.1 secretion system apparatus protein SsaO Virulence SPI-2 Protein 2e-36 99
ssaO AAX49618.1 SsaO Virulence SPI-2 Protein 2e-30 98
ssaO NP_456112.1 putative type III secretion protein Virulence SPI-2 Protein 8e-36 98
ssaO NP_805087.1 type III secretion protein Virulence SPI-2 Protein 8e-36 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SeD_A1927 YP_002215716.1 secretion system apparatus SsaO VFG0516 Protein 8e-37 99