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Name : SeD_A1429 (SeD_A1429) Accession : YP_002215262.1 Strain : Salmonella enterica CT_02021853 Genome accession: NC_011205 Putative virulence/resistance : Virulence Product : guanine nucleotide exchange factor SopE Function : - COG functional category : - COG ID : - EC number : - Position : 1396231 - 1396953 bp Length : 723 bp Strand : - Note : identified by match to protein family HMM PF05364; match to protein family HMM PF07487 DNA sequence : GTGACAAAAATAACTTTATTTCCCCATAACTTTAGAATCCAAAAACAGGAAGCCACACCACTAAAAGAAAAATCAACCGA GAAAAATTCTTTAGCAAAAAGTATTCTCGCAGTAAAAAATCACTTCATCAAATTAAATTCAAAATTATCGGAACGTTTTA TTTCGCATAAGAACACTGAATCTTCTGCAACACACTTTCACCGAGGAAGCGCATCTGAGGGCCGGGCAGTGTTGACAAAT AAAGTCGTTAAAAACTTTATGCTTCAAACGCTCCATGATATAGATATTAGAGGTAGCGCGAGTAAAGACCCCGCATACGC CAGCCAGACCCGTGAAGCTATACTATCGGCAGTTTACAGCAAGTATAAAGATCAGTATTGTAACTTGCTCATCAGCAAAG GAATCGACATAGCGCCTTTTCTTAAGGAAATTGGCGAGGCTGCGCAAAATGCAGGTCTGCCCGGAGCAACCAAGAATGAC GTTTTTACGCCAAGCGGCGCAGGAGCCAATCCTTTTATAACTCCGTTGATTACATCAGCATACAGTAAGTATCCACATAT GTTTACCAGTCAACATCAGAAGGCATCCTTTAACATCTATGCGGAGAAGATCATTATGACAGAAGTTGTACCGCTGTTTA ATGAGTGTGCTATGCCGACTCCACAGCAATTCCAACAAATACTAGAAAACATTGCTAATAAATATATCCAAAACACTCCC TGA Protein sequence : MTKITLFPHNFRIQKQEATPLKEKSTEKNSLAKSILAVKNHFIKLNSKLSERFISHKNTESSATHFHRGSASEGRAVLTN KVVKNFMLQTLHDIDIRGSASKDPAYASQTREAILSAVYSKYKDQYCNLLISKGIDIAPFLKEIGEAAQNAGLPGATKND VFTPSGAGANPFITPLITSAYSKYPHMFTSQHQKASFNIYAEKIIMTEVVPLFNECAMPTPQQFQQILENIANKYIQNTP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sopE | NP_458691.1 | invasion-associated secreted protein. | Virulence | SPI-7 | Protein | 3e-98 | 90 |
| sopE | NP_807899.1 | invasion-associated secreted protein | Virulence | SPI-7 | Protein | 3e-98 | 90 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SeD_A1429 | YP_002215262.1 | guanine nucleotide exchange factor SopE | VFG0467 | Protein | 2e-79 | 67 |
