|
Name : SeD_A1238 (SeD_A1238) Accession : YP_002215089.1 Strain : Salmonella enterica CT_02021853 Genome accession: NC_011205 Putative virulence/resistance : Unknown Product : IS3 OrfA Function : - COG functional category : - COG ID : - EC number : - Position : 1236122 - 1236421 bp Length : 300 bp Strand : + Note : identified by match to protein family HMM PF01527 DNA sequence : ATGACAAAACCAGCATCAACCACCAAAAAGCCACGCAAGCAGCACACGCCTGAATTTCGTCAGGAAGCTCTGAAACTGGC TGAACGCATTGGGGTGGCCGCTGCCGCCCGCGAACTTAACCTGTATGAATCACAGCTCTACAACTGGCGAAGCAAACAGC AAAATCAGCTCTCTTCTTCTGAACGCGAGCAGGAGATGTCCGCTGAGATCGCTCGTCTGAAACGTCAACTGGCAGAACGG GATGAGGAACTGGCCATTATCCAGAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGA Protein sequence : MTKPASTTKKPRKQHTPEFRQEALKLAERIGVAAAARELNLYESQLYNWRSKQQNQLSSSEREQEMSAEIARLKRQLAER DEELAIIQKAATYFAKRLK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ECO111_3733 | YP_003236069.1 | putative IS3 transposase InsE | Not tested | LEE | Protein | 1e-35 | 88 |
| unnamed | AAC28568.1 | YIS1_SHISO | Not tested | LEE | Protein | 7e-36 | 88 |
| unnamed | AAL57518.1 | transposase 2 | Not tested | LEE | Protein | 7e-36 | 88 |
| unnamed | AAL57580.1 | transposase 2 | Not tested | LEE | Protein | 7e-36 | 88 |
| unnamed | AAT48700.1 | transposon-related | Not tested | PAI II 4787 | Protein | 5e-30 | 83 |
| yis1_SHISO | CAD66178.1 | hypothetical protein of insertion element IS1 | Not tested | PAI III 536 | Protein | 5e-30 | 83 |
| S4064 | NP_839234.1 | IS3 orfA | Not tested | SHI-2 | Protein | 1e-30 | 83 |
| SF3703 | NP_709442.1 | IS3 ORF1 | Not tested | SHI-2 | Protein | 1e-30 | 83 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SeD_A1238 | YP_002215089.1 | IS3 OrfA | VFG1632 | Protein | 2e-30 | 83 |
| SeD_A1238 | YP_002215089.1 | IS3 OrfA | VFG0603 | Protein | 4e-31 | 83 |
